FFCP PHASE1:Hg19::chr1:120049826..120049843,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3283 | |EntrezGene=3283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5217 | |HGNC=5217 | ||
|TSSclassifier=strong | |||
|UniProt=P14060 | |UniProt=P14060 | ||
|association_with_transcript=0bp_to_ENST00000235547,ENST00000369413,ENST00000492140,NM_000862,uc001ehv.1_5end | |association_with_transcript=0bp_to_ENST00000235547,ENST00000369413,ENST00000492140,NM_000862,uc001ehv.1_5end | ||
|cluster_id=chr1:120049826..120049843,+ | |||
|coexpression_cluster_id=C2491 | |||
|description=CAGE_peak_1_at_HSD3B1_5end | |description=CAGE_peak_1_at_HSD3B1_5end | ||
|id=chr1:120049826..120049843,+ | |id=chr1:120049826..120049843,+ | ||
|ontology_enrichment_celltype=CL:0002541!1.16e-13!3;CL:0000077!1.32e-09!19;CL:0000039!1.91e-09!7;CL:0000586!1.91e-09!7 | |ontology_enrichment_celltype=CL:0002541!1.16e-13!3;CL:0000077!1.32e-09!19;CL:0000039!1.91e-09!7;CL:0000586!1.91e-09!7 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.36e-23;3!CL:0000077;3.59e-13;19!CL:0002231;3.09e-10;3!CL:0000039;9.55e-10;7!CL:0000586;9.55e-10;7!CL:0002563;4.62e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.36e-23,3;CL:0000077,3.63e-13,19;CL:0002231,3.64e-10,3;CL:0000039,9.56e-10,7;CL:0000586,9.56e-10,7;CL:0002563,4.54e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.59e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;3.17e-08;1!DOID:10165;3.17e-08;1!DOID:1798;3.17e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.79e-08,1;DOID:10165,3.79e-08,1;DOID:1798,3.79e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.16e-13!3;UBERON:0000920!1.16e-13!3;UBERON:0005631!1.29e-13!14;UBERON:0000158!1.29e-13!14;UBERON:0003124!4.16e-10!7;UBERON:0004923!1.29e-07!57;UBERON:0000478!1.67e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.36e-23;3!UBERON:0000920;3.36e-23;3!UBERON:0005631;3.58e-12;10!UBERON:0000158;3.58e-12;10!UBERON:0001882;3.17e-08;1!UBERON:0005403;3.17e-08;1!UBERON:0001052;4.08e-08;4!UBERON:0001242;4.62e-08;4!UBERON:0001262;4.62e-08;4!UBERON:0004786;4.62e-08;4!UBERON:0004808;4.62e-08;4!UBERON:0001277;4.62e-08;4!UBERON:0000478;1.25e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.36e-23,3;UBERON:0003124,1.76e-17,7;UBERON:0005631,3.01e-13,14;UBERON:0000158,3.01e-13,14;UBERON:0001882,2.64e-08,1;UBERON:0005403,2.64e-08,1;UBERON:0001052,4.08e-08,4;UBERON:0001242,4.54e-08,4;UBERON:0001262,4.54e-08,4;UBERON:0004786,4.54e-08,4;UBERON:0004808,4.54e-08,4;UBERON:0001277,4.54e-08,4;UBERON:0000478,1.25e-07,24 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,55.2901357128395,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6999941532509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20575750823834,0,7.19805536510811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1754700926492,1.00253235151642,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984043937099117,0,312.832511362485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,326.396557293093,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,61.596077062324,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65471377237555,0,0,0,0,0,0,0,0,0,0,0,0,0.683652335082007,10.6059396018508,1.34636466614658,114.622977377719,307.836119141302,842.697859297133,460.009011704082,0,0,0,0,0,0,0,0,0,0,5.65412285735763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,13.0809370738705,0,0,0,0,0,246.732356281617,208.977699248508,0,23.9213407455934,0.337884881306145,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,4.35454082023081,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,1.04762677792569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,891.813629615171,0,0,0.0679697329768317,0,0,0,0,0,24.1034060449859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,1.08043821351123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.917899467677836,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@HSD3B1 | |short_description=p1@HSD3B1 | ||
}} | }} |
Latest revision as of 12:00, 16 September 2015
Short description: | p1@HSD3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HSD3B1_5end |
Coexpression cluster: | C2491_placenta_chorionic_mesothelioma_choriocarcinoma_amniotic_Alveolar_rectal |
Association with transcript: | 0bp_to_ENST00000235547, ENST00000369413, ENST00000492140, NM_000862, uc001ehv.1_5end |
EntrezGene: | HSD3B1 |
HGNC: | 5217 |
UniProt: | P14060 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.36e-23 | 3 |
mesothelial cell | 3.63e-13 | 19 |
epithelial cell of prostate | 3.64e-10 | 3 |
germ line cell | 9.56e-10 | 7 |
germ cell | 9.56e-10 | 7 |
intestinal epithelial cell | 4.54e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.36e-23 | 3 |
chorion | 1.76e-17 | 7 |
extraembryonic membrane | 3.01e-13 | 14 |
membranous layer | 3.01e-13 | 14 |
nucleus accumbens | 2.64e-08 | 1 |
ventral striatum | 2.64e-08 | 1 |
rectum | 4.08e-08 | 4 |
intestinal mucosa | 4.54e-08 | 4 |
wall of intestine | 4.54e-08 | 4 |
gastrointestinal system mucosa | 4.54e-08 | 4 |
gastrointestinal system epithelium | 4.54e-08 | 4 |
intestinal epithelium | 4.54e-08 | 4 |
extraembryonic structure | 1.25e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.79e-08 | 1 |
endocrine pancreas cancer | 3.79e-08 | 1 |
pancreatic endocrine carcinoma | 3.79e-08 | 1 |