FFCP PHASE1:Hg19::chr14:87700413..87700419,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:87700413..87700419,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_at_chr14:87700413..87700419,+ | |description=CAGE_peak_at_chr14:87700413..87700419,+ | ||
|id=chr14:87700413..87700419,+ | |id=chr14:87700413..87700419,+ | ||
|ontology_enrichment_celltype=CL:0002159!3.40e-11!13;CL:0002166!1.07e-10!3;CL:0002621!1.07e-10!3;CL:0002076!2.19e-09!43;CL:0002149!4.70e-09!6;CL:0002255!4.70e-09!6;CL:0000240!1.95e-08!6;CL:0000311!1.95e-08!6;CL:0000079!1.95e-08!6;CL:0000237!1.95e-08!6;CL:0000036!1.95e-08!6;CL:0000357!1.95e-08!6;CL:0000114!1.95e-08!6;CL:0000242!2.80e-07!2 | |ontology_enrichment_celltype=CL:0002159!3.40e-11!13;CL:0002166!1.07e-10!3;CL:0002621!1.07e-10!3;CL:0002076!2.19e-09!43;CL:0002149!4.70e-09!6;CL:0002255!4.70e-09!6;CL:0000240!1.95e-08!6;CL:0000311!1.95e-08!6;CL:0000079!1.95e-08!6;CL:0000237!1.95e-08!6;CL:0000036!1.95e-08!6;CL:0000357!1.95e-08!6;CL:0000114!1.95e-08!6;CL:0000242!2.80e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002621;2.58e-33;3!CL:0002166;7.83e-16;3!CL:0002159;5.43e-13;14!CL:0002149;1.55e-08;6!CL:0002255;1.55e-08;6!CL:0002076;2.30e-08;42!CL:0000123;4.83e-07;2!CL:0000242;4.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002621,1.85e-33,3;CL:0002166,7.27e-16,3;CL:0002159,5.78e-13,14;CL:0002076,3.68e-09,42;CL:0002149,1.55e-08,6;CL:0002255,1.55e-08,6;CL:0000242,4.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005795;9.54e-11;10 | |||
|ontology_enrichment_disease=DOID:3001!4.70e-09!6 | |ontology_enrichment_disease=DOID:3001!4.70e-09!6 | ||
|ontology_enrichment_disease_v019=DOID:3371;7.03e-13;1!DOID:4549;7.03e-13;1!DOID:5861;7.03e-13;1!DOID:6496;7.03e-13;1!DOID:3001;1.55e-08;6!DOID:4468;5.90e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.03e-13,1;DOID:4549,7.03e-13,1;DOID:5861,7.03e-13,1;DOID:6496,7.03e-13,1;DOID:3001,1.55e-08,6;DOID:4468,5.73e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001949!1.07e-10!3;UBERON:0001708!4.18e-08!4;UBERON:0001704!4.18e-08!4 | |ontology_enrichment_uberon=UBERON:0001949!1.07e-10!3;UBERON:0001708!4.18e-08!4;UBERON:0001704!4.18e-08!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0001949;2.58e-33;3!UBERON:0003929;1.13e-14;7!UBERON:0003350;6.46e-13;8!UBERON:0001828;6.46e-13;8!UBERON:0005795;1.96e-12;1!UBERON:0001389;3.44e-12;1!UBERON:0000026;3.44e-12;1!UBERON:0008784;3.44e-12;1!UBERON:0006058;3.44e-12;1!UBERON:0003663;3.44e-12;1!UBERON:0004256;3.44e-12;1!UBERON:0004708;3.44e-12;1!UBERON:0002101;3.44e-12;1!UBERON:0004709;3.44e-12;1!UBERON:0002529;3.44e-12;1!UBERON:0010538;3.44e-12;1!UBERON:0003661;3.44e-12;1!UBERON:0010890;3.44e-12;1!UBERON:0002471;3.44e-12;1!UBERON:0001383;3.44e-12;1!UBERON:0010758;3.44e-12;1!UBERON:0010707;3.44e-12;1!UBERON:0000978;3.44e-12;1!UBERON:0002103;3.44e-12;1!UBERON:0001665;3.44e-12;1!UBERON:0003823;3.44e-12;1!UBERON:0000154;3.44e-12;1!UBERON:0010709;3.44e-12;1!UBERON:0001708;4.08e-12;4!UBERON:0008895;4.08e-12;4!UBERON:0011159;7.11e-10;5!UBERON:0000486;8.54e-09;12!UBERON:0003729;3.70e-08;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,1.85e-33,3;UBERON:0003350,5.71e-13,8;UBERON:0001828,5.71e-13,8;UBERON:0005418,3.85e-12,1;UBERON:0001389,3.85e-12,1;UBERON:0000026,3.85e-12,1;UBERON:0008784,3.85e-12,1;UBERON:0006058,3.85e-12,1;UBERON:0003663,3.85e-12,1;UBERON:0004256,3.85e-12,1;UBERON:0004708,3.85e-12,1;UBERON:0002101,3.85e-12,1;UBERON:0004709,3.85e-12,1;UBERON:0002529,3.85e-12,1;UBERON:0010538,3.85e-12,1;UBERON:0003661,3.85e-12,1;UBERON:0010890,3.85e-12,1;UBERON:0002471,3.85e-12,1;UBERON:0001383,3.85e-12,1;UBERON:0004357,3.85e-12,1;UBERON:0004347,3.85e-12,1;UBERON:0005420,3.85e-12,1;UBERON:0005732,3.85e-12,1;UBERON:0010758,3.85e-12,1;UBERON:0010707,3.85e-12,1;UBERON:0000978,3.85e-12,1;UBERON:0002103,3.85e-12,1;UBERON:0001665,3.85e-12,1;UBERON:0003823,3.85e-12,1;UBERON:0000154,3.85e-12,1;UBERON:0010709,3.85e-12,1;UBERON:0005733,3.85e-12,1;UBERON:0005730,3.85e-12,1;UBERON:0001708,3.86e-12,4;UBERON:0008895,3.86e-12,4;UBERON:0011159,6.80e-10,5;UBERON:0010188,2.17e-08,6;UBERON:0002539,2.17e-08,6;UBERON:0008816,2.17e-08,6;UBERON:0003729,3.44e-08,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.54608682530637,1.63647672354501,4.01526433544605,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49870671894216,0.839910640994298,2.97727704209012,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539107359730903,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,9.28391483923319,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0.693373365065693,0,0,0,0.34945333648406,0,0,0,0,0,186.48519569914,0,0.137041924646751,0,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,2.25054407851027,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.780358523969,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0.682986574053893,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,9.0689588311821,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.426067023795788,0,0,14.579700126223,11.4664672677292,0,0,0,1.29485767437579,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,2.03448089157869,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0,0,0,0,0,0,0,0.46480320348181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,1.54608682530637,1.63647672354501,4.01526433544605,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49870671894216,0.839910640994298,2.97727704209012,0,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539107359730903,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,1.52925763827023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0,0,0,0,0,0,0,9.28391483923319,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0.468528891450678,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0.569219092059585,0.693373365065693,0,0,0,0.34945333648406,0,0,0,0,0,186.48519569914,0,0.137041924646751,0,0,0,0,0,0,0,0.572682980829578,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254019996197353,0,0,2.25054407851027,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,106.780358523969,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0.690359926060101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0.682986574053893,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,9.0689588311821,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0.426067023795788,0,0,14.579700126223,11.4664672677292,0,0,0,1.29485767437579,0.615976841137482,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0.0620747142958579,0.33639558774184,0,0,0.217716747896961,0,0,0,0,0.0814032686109745,0,0,0,0,0,2.03448089157869,0,0,0 | ||
|short_description=p@chr14:87700413..87700419,+ | |short_description=p@chr14:87700413..87700419,+ | ||
}} | }} |
Latest revision as of 23:20, 24 July 2015
Short description: | p@chr14:87700413..87700419, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:87700413..87700419, + |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gingival epithelial cell | 1.85e-33 | 3 |
epithelial cell of Malassez | 7.27e-16 | 3 |
general ecto-epithelial cell | 5.78e-13 | 14 |
endo-epithelial cell | 3.68e-09 | 42 |
epithelial cell of uterus | 1.55e-08 | 6 |
stromal cell of endometrium | 1.55e-08 | 6 |
Merkel cell | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.03e-13 | 1 |
extraosseous chondrosarcoma | 7.03e-13 | 1 |
myxoid chondrosarcoma | 7.03e-13 | 1 |
extraskeletal myxoid chondrosarcoma | 7.03e-13 | 1 |
female reproductive endometrioid cancer | 1.55e-08 | 6 |
clear cell adenocarcinoma | 5.73e-07 | 2 |