FFCP PHASE1:Hg19::chr1:182641988..182641999,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85397 | |EntrezGene=85397 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16810 | |HGNC=16810 | ||
|TSSclassifier=strong | |||
|UniProt=P57771 | |UniProt=P57771 | ||
|association_with_transcript=43bp_to_ENST00000367557_5end | |association_with_transcript=43bp_to_ENST00000367557_5end | ||
|cluster_id=chr1:182641988..182641999,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_9_at_RGS8_5end | |description=CAGE_peak_9_at_RGS8_5end | ||
|id=chr1:182641988..182641999,- | |id=chr1:182641988..182641999,- | ||
|ontology_enrichment_celltype=CL:0000945!1.18e-10!24;CL:0000826!1.18e-10!24 | |ontology_enrichment_celltype=CL:0000945!1.18e-10!24;CL:0000826!1.18e-10!24 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24!CL:0000542;1.54e-08;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.54e-08;53 | |||
|ontology_enrichment_disease=DOID:630!7.57e-17!1;DOID:0050177!7.57e-17!1;DOID:0050427!7.57e-17!1;DOID:0060058!3.33e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.00e-40;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.00e-40,10;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0000369!1.20e-34!4;UBERON:0002435!1.20e-34!4;UBERON:0000204!1.20e-34!4;UBERON:0010082!1.20e-34!4;UBERON:0005383!2.41e-21!3;UBERON:0005382!2.41e-21!3;UBERON:0001049!2.09e-20!57;UBERON:0005068!2.09e-20!57;UBERON:0006241!2.09e-20!57;UBERON:0007135!2.09e-20!57;UBERON:0009663!3.92e-20!7;UBERON:0003076!1.54e-16!15;UBERON:0003057!1.54e-16!15;UBERON:0001874!1.65e-16!1;UBERON:0002336!2.25e-16!1;UBERON:0001018!2.25e-16!1;UBERON:0002473!2.25e-16!1;UBERON:0005340!2.25e-16!1;UBERON:0002316!2.25e-16!1;UBERON:0003544!2.25e-16!1;UBERON:0001020!2.25e-16!1;UBERON:0005970!2.25e-16!1;UBERON:0002437!2.25e-16!1;UBERON:0001882!2.63e-16!1;UBERON:0005403!2.63e-16!1;UBERON:0002308!8.16e-16!9;UBERON:0002420!8.16e-16!9;UBERON:0000125!8.16e-16!9;UBERON:0007245!8.16e-16!9;UBERON:0010009!8.16e-16!9;UBERON:0010011!8.16e-16!9;UBERON:0000454!8.16e-16!9;UBERON:0002616!1.46e-15!59;UBERON:0001017!7.34e-14!82;UBERON:0003075!2.35e-13!86;UBERON:0007284!2.35e-13!86;UBERON:0005743!3.40e-13!86;UBERON:0000955!4.68e-13!69;UBERON:0006238!4.68e-13!69;UBERON:0002346!9.83e-13!90;UBERON:0004733!5.06e-12!12;UBERON:0002028!5.06e-12!12;UBERON:0007277!5.06e-12!12;UBERON:0000073!6.76e-12!94;UBERON:0001016!6.76e-12!94;UBERON:0004732!3.82e-11!13;UBERON:0007023!6.64e-10!115;UBERON:0002780!4.54e-09!41;UBERON:0001890!4.54e-09!41;UBERON:0006240!4.54e-09!41;UBERON:0001873!4.70e-09!2;UBERON:0010122!4.70e-09!2;UBERON:0003080!7.38e-09!42;UBERON:0005162!7.49e-09!2;UBERON:0000122!7.49e-09!2;UBERON:0002298!1.42e-08!8;UBERON:0002680!9.20e-08!9;UBERON:0001895!9.20e-08!9;UBERON:0010092!9.20e-08!9;UBERON:0002791!2.00e-07!33;UBERON:0001893!3.22e-07!34;UBERON:0000033!4.04e-07!123;UBERON:0000153!9.25e-07!129;UBERON:0007811!9.25e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p9@RGS8 | |short_description=p9@RGS8 | ||
}} | }} |
Latest revision as of 01:26, 19 September 2015
Short description: | p9@RGS8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RGS8_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | 43bp_to_ENST00000367557_5end |
EntrezGene: | RGS8 |
HGNC: | 16810 |
UniProt: | P57771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.00e-40 | 10 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |