FFCP PHASE1:Hg19::chr1:204135454..204135486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5972 | |EntrezGene=5972 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9958 | |HGNC=9958 | ||
|TSSclassifier=strong | |||
|UniProt=F5H181,P00797 | |UniProt=F5H181,P00797 | ||
|association_with_transcript=0bp_to_ENST00000367195,ENST00000545733,NM_000537,uc001haq.2_5end | |association_with_transcript=0bp_to_ENST00000367195,ENST00000545733,NM_000537,uc001haq.2_5end | ||
|cluster_id=chr1:204135454..204135486,- | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_1_at_REN_5end | |description=CAGE_peak_1_at_REN_5end | ||
|id=chr1:204135454..204135486,- | |id=chr1:204135454..204135486,- | ||
|ontology_enrichment_celltype=CL:1000507!8.60e-07!12;CL:1000494!8.60e-07!12 | |ontology_enrichment_celltype=CL:1000507!8.60e-07!12;CL:1000494!8.60e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002195;2.51e-11;2!CL:0002571;2.51e-11;2!CL:0002322;2.35e-09;5!CL:0002541;1.11e-07;3!CL:0000034;4.94e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002195,2.20e-11,2;CL:0002571,2.20e-11,2;CL:0002322,2.80e-09,5;CL:0002541,1.21e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005156!4.41e-10!59;UBERON:0000990!4.41e-10!59;UBERON:0002417!2.46e-09!61;UBERON:0000916!2.46e-09!61;UBERON:0003886!8.53e-09!63;UBERON:0003064!5.34e-08!37;UBERON:0003133!1.14e-07!48;UBERON:0003688!1.38e-07!6;UBERON:0002358!1.38e-07!6;UBERON:0003684!1.38e-07!6;UBERON:0001178!1.38e-07!6;UBERON:0002553!2.27e-07!70;UBERON:0006554!2.49e-07!44;UBERON:0001008!4.42e-07!45;UBERON:0003124!4.95e-07!7;UBERON:0009773!8.60e-07!12;UBERON:0001231!8.60e-07!12;UBERON:0004810!8.60e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;4.57e-12;4!UBERON:0005631;1.56e-08;10!UBERON:0000158;1.56e-08;10!UBERON:0006947;1.00e-07;3!UBERON:0004054;1.00e-07;3!UBERON:0003124;1.11e-07;3!UBERON:0000920;1.11e-07;3!UBERON:0003135;1.41e-07;11!UBERON:0000478;2.44e-07;24!UBERON:0001301;9.29e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,4.16e-12,4;UBERON:0005631,3.82e-09,14;UBERON:0000158,3.82e-09,14;UBERON:0003133,8.47e-09,48;UBERON:0005156,2.50e-08,59;UBERON:0000990,2.50e-08,59;UBERON:0006947,9.55e-08,3;UBERON:0004054,9.55e-08,3;UBERON:0000920,1.21e-07,3;UBERON:0003135,1.40e-07,11;UBERON:0000478,2.52e-07,24;UBERON:0003124,4.09e-07,7;UBERON:0001301,9.30e-07,1;UBERON:0004175,9.41e-07,25 | |||
|phase1_expression=0,0.856402095563933,0.281908808191942,0,2.23480547213644,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9845854080407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0.503760491138201,0.508681776931463,0,0,0,0,0,4.53156377191122,1.45125477021519,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,24.2003686092232,15.6011155367049,0,0,0,6.57698770827479,48.8359444852299,0,0.65147236858747,4.97548728239564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0.364182336013434,0.262248829918848,0.902399225814824,2.0794141018192,0,0,0.105551628892876,0,0.170093705276516,0,0,0.812839312631559,1.00337954770971,0,0.831076008928724,0,0,0,0,0,0,6.38854272215878,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,3.41757669408298,0,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,3.16950440270266,4.64099698787152,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.77380532035299,0,0,0,0,0,0,0,8.94366107379402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,0.31900115973192,13.5564438234756,1.06606955203727,0,0,0,0,0.980312671588698,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.23864687619,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.89268582976749,1.47803639470798,0.720599767084807,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,93.2271517349514,769.036716647207,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0.410462603746695,0,0.339936274560377,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.776314784381297,0,0,7.82617592717601,0,0,0,0,0.214821114084977,0,5.97143833047924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2761097888695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.93466545821555,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39516449665789,0,0,0,0,0.23806443146374,0.0645889098360061,0.434523000071005,0,1.46388464039779,0,0,0,0,0.143444410785353,0,0,0,0,0,0,7.09000376260625,0.406896178315738,0,0,0 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|phase1_expression=0,0.856402095563933,0.281908808191942,0,2.23480547213644,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,2.24203425192614,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9845854080407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0,0,0.257640540045629,0,0,0,0,0,0,0.710019185033229,0.503760491138201,0.508681776931463,0,0,0,0,0,4.53156377191122,1.45125477021519,1.00928340350251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.535908257668,24.2003686092232,15.6011155367049,0,0,0,6.57698770827479,48.8359444852299,0,0.65147236858747,4.97548728239564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0.384417447767103,0.511707249066704,0.321707842287215,0,0.154209693802656,0,0,0,0,0,0,0,0,0.364182336013434,0.262248829918848,0.902399225814824,2.0794141018192,0,0,0.105551628892876,0,0.170093705276516,0,0,0.812839312631559,1.00337954770971,0,0.831076008928724,0,0,0,0,0,0,6.38854272215878,0,0,0,0,4.82051789532479,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,3.41757669408298,0,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,3.16950440270266,4.64099698787152,0.282810863907425,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,1.77380532035299,0,0,0,0,0,0,0,8.94366107379402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17015492401254,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15460723810632,0,0,0,0,0.31900115973192,13.5564438234756,1.06606955203727,0,0,0,0,0.980312671588698,0.167821586975843,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,0,0,0,0,0,1.57833761139756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.23864687619,0,0,0,0,0,0,0,0.137041924646751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0.89268582976749,1.47803639470798,0.720599767084807,0,0,0,0,0.688992370603241,0,0,0,0,0,0,0,0,0,0,93.2271517349514,769.036716647207,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.326587360109409,0,0.410462603746695,0,0.339936274560377,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0.776314784381297,0,0,7.82617592717601,0,0,0,0,0.214821114084977,0,5.97143833047924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66995985250795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.2761097888695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.93466545821555,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.714765441766563,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0.245148321753905,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39516449665789,0,0,0,0,0.23806443146374,0.0645889098360061,0.434523000071005,0,1.46388464039779,0,0,0,0,0.143444410785353,0,0,0,0,0,0,7.09000376260625,0.406896178315738,0,0,0 | ||
|short_description=p1@REN | |short_description=p1@REN | ||
}} | }} |
Latest revision as of 00:29, 20 September 2015
Short description: | p1@REN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_REN_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | 0bp_to_ENST00000367195, ENST00000545733, NM_000537, uc001haq.2_5end |
EntrezGene: | REN |
HGNC: | 9958 |
UniProt: | F5H181P00797 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stem cell | 2.20e-11 | 2 |
hepatic mesenchymal stem cell | 2.20e-11 | 2 |
embryonic stem cell | 2.80e-09 | 5 |
chorionic membrane mesenchymal stem cell | 1.21e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 4.16e-12 | 4 |
extraembryonic membrane | 3.82e-09 | 14 |
membranous layer | 3.82e-09 | 14 |
reproductive organ | 8.47e-09 | 48 |
reproductive structure | 2.50e-08 | 59 |
reproductive system | 2.50e-08 | 59 |
male genital duct | 9.55e-08 | 3 |
internal male genitalia | 9.55e-08 | 3 |
egg chorion | 1.21e-07 | 3 |
male reproductive organ | 1.40e-07 | 11 |
extraembryonic structure | 2.52e-07 | 24 |
chorion | 4.09e-07 | 7 |
epididymis | 9.30e-07 | 1 |
internal genitalia | 9.41e-07 | 25 |