FFCP PHASE1:Hg19::chr16:15951167..15951206,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4629 | |EntrezGene=4629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7569 | |HGNC=7569 | ||
|TSSclassifier=strong | |||
|UniProt=P35749,Q3MIV8 | |UniProt=P35749,Q3MIV8 | ||
|association_with_transcript=-277bp_to_ENST00000300036,ENST00000338282_5end | |association_with_transcript=-277bp_to_ENST00000300036,ENST00000338282_5end | ||
|cluster_id=chr16:15951167..15951206,- | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_2_at_MYH11_5end | |description=CAGE_peak_2_at_MYH11_5end | ||
|id=chr16:15951167..15951206,- | |id=chr16:15951167..15951206,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.67e-12;65!UBERON:0007297;3.86e-09;2!UBERON:0006965;4.53e-09;2!UBERON:0004872;7.68e-09;7!UBERON:0006595;3.63e-07;86 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.01e-70!115;UBERON:0002298!7.75e-10!8;UBERON:0000062!1.39e-07!511;UBERON:0006947!1.57e-07!3;UBERON:0004054!1.57e-07!3;UBERON:0001049!5.74e-07!57;UBERON:0005068!5.74e-07!57;UBERON:0006241!5.74e-07!57;UBERON:0007135!5.74e-07!57;UBERON:0003135!9.43e-07!11 | |ontology_enrichment_uberon=UBERON:0007023!6.01e-70!115;UBERON:0002298!7.75e-10!8;UBERON:0000062!1.39e-07!511;UBERON:0006947!1.57e-07!3;UBERON:0004054!1.57e-07!3;UBERON:0001049!5.74e-07!57;UBERON:0005068!5.74e-07!57;UBERON:0006241!5.74e-07!57;UBERON:0007135!5.74e-07!57;UBERON:0003135!9.43e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.87e-15;33!UBERON:0006947;7.64e-13;3!UBERON:0004054;7.64e-13;3!UBERON:0000160;8.40e-13;17!UBERON:0003135;1.53e-12;11!UBERON:0005409;3.26e-12;22!UBERON:0007023;7.05e-10;114!UBERON:0005904;9.75e-10;4!UBERON:0000059;5.43e-09;11!UBERON:0001829;1.58e-08;2!UBERON:0005090;3.18e-08;2!UBERON:0001630;3.18e-08;2!UBERON:0003101;5.02e-08;22!UBERON:0000079;5.02e-08;22!UBERON:0002108;2.02e-07;4!UBERON:0001155;2.53e-07;9!UBERON:0001555;2.97e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.84e-43,114;UBERON:0005409,1.24e-15,25;UBERON:0006947,7.65e-13,3;UBERON:0004054,7.65e-13,3;UBERON:0000160,7.75e-13,17;UBERON:0003135,1.42e-12,11;UBERON:0004921,2.14e-11,118;UBERON:0005904,9.76e-10,4;UBERON:0001007,2.49e-09,145;UBERON:0001555,2.49e-09,145;UBERON:0007026,2.49e-09,145;UBERON:0002553,3.87e-09,61;UBERON:0000059,5.25e-09,11;UBERON:0001829,1.58e-08,2;UBERON:0005090,2.49e-08,2;UBERON:0001630,2.49e-08,2;UBERON:0003101,4.83e-08,22;UBERON:0000079,4.83e-08,22;UBERON:0004119,5.88e-08,160;UBERON:0000925,5.88e-08,160;UBERON:0006595,5.88e-08,160;UBERON:0002108,1.89e-07,4;UBERON:0001155,2.49e-07,9 | |||
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| ||
|short_description=p2@MYH11 | |short_description=p2@MYH11 | ||
}} | }} |
Latest revision as of 21:12, 24 September 2015
Short description: | p2@MYH11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MYH11_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -277bp_to_ENST00000300036, ENST00000338282_5end |
EntrezGene: | MYH11 |
HGNC: | 7569 |
UniProt: | P35749Q3MIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.84e-43 | 114 |
gastrointestinal system | 1.24e-15 | 25 |
male genital duct | 7.65e-13 | 3 |
internal male genitalia | 7.65e-13 | 3 |
intestine | 7.75e-13 | 17 |
male reproductive organ | 1.42e-12 | 11 |
subdivision of digestive tract | 2.14e-11 | 118 |
duct of male reproductive system | 9.76e-10 | 4 |
digestive system | 2.49e-09 | 145 |
digestive tract | 2.49e-09 | 145 |
primitive gut | 2.49e-09 | 145 |
anatomical cavity | 3.87e-09 | 61 |
large intestine | 5.25e-09 | 11 |
major salivary gland | 1.58e-08 | 2 |
muscle structure | 2.49e-08 | 2 |
muscle organ | 2.49e-08 | 2 |
male organism | 4.83e-08 | 22 |
male reproductive system | 4.83e-08 | 22 |
endoderm-derived structure | 5.88e-08 | 160 |
endoderm | 5.88e-08 | 160 |
presumptive endoderm | 5.88e-08 | 160 |
small intestine | 1.89e-07 | 4 |
colon | 2.49e-07 | 9 |