FFCP PHASE1:Hg19::chr20:62796137..62796154,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:62796137..62796154,+ | |||
|description=CAGE_peak_at_chr20:62796137..62796154,+ | |description=CAGE_peak_at_chr20:62796137..62796154,+ | ||
|id=chr20:62796137..62796154,+ | |id=chr20:62796137..62796154,+ | ||
|ontology_enrichment_celltype=CL:0000242!7.35e-12!2;CL:0000540!2.89e-08!6;CL:0000031!2.89e-08!6;CL:0000404!2.89e-08!6;CL:0002553!7.90e-07!1 | |ontology_enrichment_celltype=CL:0000242!7.35e-12!2;CL:0000540!2.89e-08!6;CL:0000031!2.89e-08!6;CL:0000404!2.89e-08!6;CL:0002553!7.90e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.17e-31;2!CL:0000242;1.17e-31;2!CL:0002553;5.53e-17;1!CL:0000167;1.93e-16;1!CL:0000164;1.93e-16;1!CL:0000502;1.93e-16;1!CL:0000172;1.93e-16;1!CL:0000173;1.93e-16;1!CL:0000312;2.68e-13;5!CL:0000240;3.06e-11;6!CL:0000311;3.06e-11;6!CL:0000079;3.06e-11;6!CL:0000237;3.06e-11;6!CL:0000362;8.60e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.00e-31,2;CL:0002553,5.53e-17,1;CL:0000167,1.21e-16,1;CL:0000164,1.21e-16,1;CL:0000502,1.21e-16,1;CL:0000172,1.21e-16,1;CL:0000173,1.21e-16,1;CL:0002351,1.21e-16,1;CL:0000312,2.52e-13,5;CL:0000240,2.91e-11,6;CL:0000311,2.91e-11,6;CL:0000079,2.91e-11,6;CL:0000237,2.91e-11,6;CL:0000036,2.91e-11,6;CL:0000357,2.91e-11,6;CL:0000114,2.91e-11,6;CL:0000362,8.31e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.66e-21;3!CL:0002351;1.93e-16;1!CL:0000357;3.06e-11;6!CL:0000114;3.06e-11;6 | |||
|ontology_enrichment_disease=DOID:169!2.43e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.93e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.21e-16,1 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.05e-26!94;UBERON:0001016!1.05e-26!94;UBERON:0001049!1.12e-26!57;UBERON:0005068!1.12e-26!57;UBERON:0006241!1.12e-26!57;UBERON:0007135!1.12e-26!57;UBERON:0001017!2.58e-26!82;UBERON:0005743!6.97e-25!86;UBERON:0002616!3.46e-20!59;UBERON:0003076!3.52e-20!15;UBERON:0003057!3.52e-20!15;UBERON:0000955!1.05e-18!69;UBERON:0006238!1.05e-18!69;UBERON:0003075!2.19e-18!86;UBERON:0007284!2.19e-18!86;UBERON:0002346!2.21e-17!90;UBERON:0004121!1.95e-15!169;UBERON:0000924!5.96e-15!173;UBERON:0006601!5.96e-15!173;UBERON:0004733!1.41e-14!12;UBERON:0002028!1.41e-14!12;UBERON:0007277!1.41e-14!12;UBERON:0004732!2.07e-13!13;UBERON:0002780!3.39e-12!41;UBERON:0001890!3.39e-12!41;UBERON:0006240!3.39e-12!41;UBERON:0001894!4.43e-12!7;UBERON:0006222!4.43e-12!7;UBERON:0001905!6.61e-12!2;UBERON:0002757!6.61e-12!2;UBERON:0010134!6.61e-12!2;UBERON:0002784!6.61e-12!2;UBERON:0005408!6.61e-12!2;UBERON:0001899!6.61e-12!2;UBERON:0003080!7.28e-12!42;UBERON:0007023!2.47e-11!115;UBERON:0000033!3.93e-10!123;UBERON:0000153!1.75e-09!129;UBERON:0007811!1.75e-09!129;UBERON:0002680!1.97e-09!9;UBERON:0001895!1.97e-09!9;UBERON:0010092!1.97e-09!9;UBERON:0003056!3.70e-09!61;UBERON:0002037!1.66e-08!6;UBERON:0006215!1.66e-08!6;UBERON:0002240!1.43e-07!3;UBERON:0001896!3.35e-07!3;UBERON:0005290!3.35e-07!3;UBERON:0010096!3.35e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;7.33e-32;2!UBERON:0002757;7.33e-32;2!UBERON:0010134;7.33e-32;2!UBERON:0005408;7.33e-32;2!UBERON:0001899;7.33e-32;2!UBERON:0003296;1.79e-16;4!UBERON:0010133;1.79e-16;4!UBERON:0002784;1.79e-16;4!UBERON:0002037;3.75e-11;6!UBERON:0001894;7.98e-10;7!UBERON:0002680;9.84e-08;9!UBERON:0001895;9.84e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,7.33e-32,2;UBERON:0002757,7.33e-32,2;UBERON:0010134,7.33e-32,2;UBERON:0005408,7.33e-32,2;UBERON:0001899,7.33e-32,2;UBERON:0003296,1.79e-16,4;UBERON:0010133,1.79e-16,4;UBERON:0002784,1.79e-16,4;UBERON:0002037,3.75e-11,6;UBERON:0006215,3.75e-11,6;UBERON:0001894,7.99e-10,7;UBERON:0006222,7.99e-10,7;UBERON:0002680,9.85e-08,9;UBERON:0001895,9.85e-08,9;UBERON:0010092,9.85e-08,9;UBERON:0000073,4.20e-07,53;UBERON:0002616,4.20e-07,53 | |||
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|short_description=p@chr20:62796137..62796154,+ | |short_description=p@chr20:62796137..62796154,+ | ||
}} | }} |
Latest revision as of 16:32, 28 July 2015
Short description: | p@chr20:62796137..62796154, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:62796137..62796154, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.00e-31 | 2 |
lung fibroblast | 5.53e-17 | 1 |
peptide hormone secreting cell | 1.21e-16 | 1 |
enteroendocrine cell | 1.21e-16 | 1 |
type D enteroendocrine cell | 1.21e-16 | 1 |
somatostatin secreting cell | 1.21e-16 | 1 |
pancreatic D cell | 1.21e-16 | 1 |
progenitor cell of endocrine pancreas | 1.21e-16 | 1 |
keratinocyte | 2.52e-13 | 5 |
stratified squamous epithelial cell | 2.91e-11 | 6 |
keratin accumulating cell | 2.91e-11 | 6 |
stratified epithelial cell | 2.91e-11 | 6 |
keratinizing barrier epithelial cell | 2.91e-11 | 6 |
epithelial fate stem cell | 2.91e-11 | 6 |
stratified epithelial stem cell | 2.91e-11 | 6 |
surface ectodermal cell | 2.91e-11 | 6 |
epidermal cell | 8.31e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
pineal body | 7.33e-32 | 2 |
regional part of epithalamus | 7.33e-32 | 2 |
secretory circumventricular organ | 7.33e-32 | 2 |
circumventricular organ | 7.33e-32 | 2 |
epithalamus | 7.33e-32 | 2 |
gland of diencephalon | 1.79e-16 | 4 |
neuroendocrine gland | 1.79e-16 | 4 |
regional part of diencephalon | 1.79e-16 | 4 |
cerebellum | 3.75e-11 | 6 |
rhombic lip | 3.75e-11 | 6 |
diencephalon | 7.99e-10 | 7 |
future diencephalon | 7.99e-10 | 7 |
regional part of metencephalon | 9.85e-08 | 9 |
metencephalon | 9.85e-08 | 9 |
future metencephalon | 9.85e-08 | 9 |
regional part of nervous system | 4.20e-07 | 53 |
regional part of brain | 4.20e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.21e-16 | 1 |