FFCP PHASE1:Hg19::chr21:44590326..44590377,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1409 | |EntrezGene=1409 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2388 | |HGNC=2388 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000468016_5end | |association_with_transcript=0bp_to_ENST00000468016_5end | ||
|cluster_id=chr21:44590326..44590377,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_2_at_CRYAA_5end | |description=CAGE_peak_2_at_CRYAA_5end | ||
|id=chr21:44590326..44590377,+ | |id=chr21:44590326..44590377,+ | ||
|ontology_enrichment_celltype=CL:0000128!7.12e-19!7;CL:0000126!7.12e-19!7;CL:0000127!7.12e-19!7;CL:0002453!7.12e-19!7;CL:0000181!1.09e-16!12;CL:0000417!1.09e-16!12;CL:0000668!1.09e-16!12;CL:0000414!1.09e-16!12;CL:0000412!1.09e-16!12;CL:0000182!1.09e-16!12;CL:0002603!1.10e-16!3;CL:0002605!5.44e-08!3;CL:0000243!1.19e-07!15;CL:0000125!1.19e-07!15;CL:0000030!1.19e-07!15;CL:0000339!1.19e-07!15;CL:0000095!8.09e-07!17;CL:0000123!8.09e-07!17 | |ontology_enrichment_celltype=CL:0000128!7.12e-19!7;CL:0000126!7.12e-19!7;CL:0000127!7.12e-19!7;CL:0002453!7.12e-19!7;CL:0000181!1.09e-16!12;CL:0000417!1.09e-16!12;CL:0000668!1.09e-16!12;CL:0000414!1.09e-16!12;CL:0000412!1.09e-16!12;CL:0000182!1.09e-16!12;CL:0002603!1.10e-16!3;CL:0002605!5.44e-08!3;CL:0000243!1.19e-07!15;CL:0000125!1.19e-07!15;CL:0000030!1.19e-07!15;CL:0000339!1.19e-07!15;CL:0000095!8.09e-07!17;CL:0000123!8.09e-07!17 | ||
|ontology_enrichment_celltype_v019=CL:0000182;8.41e-30;12!CL:0002322;8.33e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.61e-30,12;CL:0002322,9.20e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.75e-15;11!UBERON:0009497;7.41e-13;13!UBERON:0003104;1.79e-11;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.51e-14!19;UBERON:0006925!6.51e-14!19;UBERON:0008836!6.51e-14!19;UBERON:0008835!6.92e-12!22;UBERON:0003894!6.92e-12!22;UBERON:0009854!2.50e-11!23;UBERON:0007499!2.40e-10!25;UBERON:0009497!2.40e-10!25;UBERON:0000015!2.40e-10!25;UBERON:0002423!2.40e-10!25;UBERON:0006235!2.40e-10!25;UBERON:0004161!2.40e-10!25;UBERON:0005172!3.07e-10!55;UBERON:0005173!3.07e-10!55;UBERON:0005057!6.53e-10!26;UBERON:0009856!6.53e-10!26;UBERON:0002417!5.02e-09!61;UBERON:0000916!5.02e-09!61;UBERON:0002037!1.35e-08!6;UBERON:0006215!1.35e-08!6;UBERON:0002365!3.69e-08!31;UBERON:0002330!3.69e-08!31;UBERON:0002368!4.05e-07!35;UBERON:0005418!9.79e-07!1;UBERON:0001389!9.79e-07!1;UBERON:0000026!9.79e-07!1;UBERON:0008784!9.79e-07!1;UBERON:0006058!9.79e-07!1;UBERON:0003663!9.79e-07!1;UBERON:0001383!9.79e-07!1;UBERON:0004256!9.79e-07!1;UBERON:0002529!9.79e-07!1;UBERON:0004708!9.79e-07!1;UBERON:0002101!9.79e-07!1;UBERON:0004709!9.79e-07!1;UBERON:0003661!9.79e-07!1;UBERON:0002471!9.79e-07!1;UBERON:0004357!9.79e-07!1;UBERON:0009872!9.79e-07!1;UBERON:0004347!9.79e-07!1;UBERON:0005420!9.79e-07!1;UBERON:0005732!9.79e-07!1;UBERON:0006057!9.79e-07!1;UBERON:0000978!9.79e-07!1;UBERON:0002103!9.79e-07!1;UBERON:0001665!9.79e-07!1;UBERON:0003823!9.79e-07!1;UBERON:0000154!9.79e-07!1;UBERON:0005733!9.79e-07!1;UBERON:0005730!9.79e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.63e-25;19!UBERON:0006925;2.63e-25;19!UBERON:0002423;4.36e-19;25!UBERON:0002365;5.62e-15;31!UBERON:0002330;5.62e-15;31!UBERON:0002368;1.16e-12;33!UBERON:0000949;2.88e-10;43!UBERON:0005172;1.21e-09;52!UBERON:0005173;1.21e-09;52!UBERON:0002417;3.23e-07;58!UBERON:0000916;3.23e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.45e-25,19;UBERON:0006925,2.45e-25,19;UBERON:0008836,2.45e-25,19;UBERON:0008835,8.42e-22,22;UBERON:0003894,8.42e-22,22;UBERON:0009854,7.94e-21,23;UBERON:0007499,4.13e-19,25;UBERON:0009497,4.13e-19,25;UBERON:0000015,4.13e-19,25;UBERON:0002423,4.13e-19,25;UBERON:0006235,4.13e-19,25;UBERON:0004161,4.13e-19,25;UBERON:0009856,2.37e-18,26;UBERON:0002365,2.75e-15,31;UBERON:0002330,2.75e-15,31;UBERON:0005172,6.15e-14,54;UBERON:0005173,6.15e-14,54;UBERON:0002368,1.83e-13,35;UBERON:0002417,2.00e-12,60;UBERON:0000916,2.00e-12,60;UBERON:0000949,2.56e-10,45;UBERON:0003929,1.77e-08,54;UBERON:0002530,1.07e-07,59;UBERON:0005177,6.93e-07,101 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,1.25381888591235,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.4600155923458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44007280025989,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,3.9313088667105,1.77236972004421,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,11.8497163394881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0733866831154,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2367866691735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,18.9079637537337,17.4721619768073,17.1879036828171,0,0,0,0,0,0,0,0,0,0,0,164.861539669923,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3362532647055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,1.72742072974897,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.204000691244253,1.25381888591235,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,37.4600155923458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44007280025989,1.24393266018445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33775174109154,3.9313088667105,1.77236972004421,0,0,0,0,0,0,0,0,0,0,1.62302566965108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,11.8497163394881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0733866831154,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.2367866691735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,18.9079637537337,17.4721619768073,17.1879036828171,0,0,0,0,0,0,0,0,0,0,0,164.861539669923,0.419636705079985,0,0,0,0,0,0,0,0,0,0,0,0,0,13.3362532647055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04993214870357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,1.72742072974897,0,1.50100742770978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.540219106755613,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CRYAA | |short_description=p2@CRYAA | ||
}} | }} |
Latest revision as of 16:00, 18 September 2015
Short description: | p2@CRYAA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CRYAA_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000468016_5end |
EntrezGene: | CRYAA |
HGNC: | 2388 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.61e-30 | 12 |
embryonic stem cell | 9.20e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 2.45e-25 | 19 |
digestive gland | 2.45e-25 | 19 |
liver bud | 2.45e-25 | 19 |
hepatic diverticulum | 8.42e-22 | 22 |
liver primordium | 8.42e-22 | 22 |
digestive tract diverticulum | 7.94e-21 | 23 |
epithelial sac | 4.13e-19 | 25 |
epithelium of foregut-midgut junction | 4.13e-19 | 25 |
anatomical boundary | 4.13e-19 | 25 |
hepatobiliary system | 4.13e-19 | 25 |
foregut-midgut junction | 4.13e-19 | 25 |
septum transversum | 4.13e-19 | 25 |
sac | 2.37e-18 | 26 |
exocrine gland | 2.75e-15 | 31 |
exocrine system | 2.75e-15 | 31 |
abdomen element | 6.15e-14 | 54 |
abdominal segment element | 6.15e-14 | 54 |
endocrine gland | 1.83e-13 | 35 |
abdominal segment of trunk | 2.00e-12 | 60 |
abdomen | 2.00e-12 | 60 |
endocrine system | 2.56e-10 | 45 |
gut epithelium | 1.77e-08 | 54 |
gland | 1.07e-07 | 59 |
trunk region element | 6.93e-07 | 101 |