FFCP PHASE1:Hg19::chr11:811679..811684,+: Difference between revisions
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|id=chr11:811679..811684,+
|short_description=p2@SNORA52
|description=CAGE_peak_2_at_SNORA52_5end
|association_with_transcript=0bp_to_ENST00000362915,NR_002585,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=619565 | |EntrezGene=619565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32645 | |HGNC=32645 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000362915,NR_002585,uc001lrs.1_5end | |||
|cluster_id=chr11:811679..811684,+ | |||
|coexpression_cluster_id=C229 | |||
|description=CAGE_peak_2_at_SNORA52_5end | |||
|id=chr11:811679..811684,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000062;1.48e-18;9!CL:0002521;1.50e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.33e-15,11;CL:0000375,2.33e-15,11;CL:0000335,2.33e-15,11;CL:0002521,1.40e-14,3 | |||
|ontology_enrichment_development_v019=CL:0000335;2.17e-15;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:154;6.30e-21;2!DOID:4236;6.30e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:154,5.70e-21,2;DOID:4236,5.70e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.50e-14;3!UBERON:0001013;2.06e-12;14!UBERON:0002072;2.86e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,1.40e-14,3;UBERON:0001013,2.00e-12,14;UBERON:0002072,2.74e-09,5 | |||
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| ||
|short_description=p2@SNORA52 | |||
}} | }} |
Latest revision as of 17:14, 24 September 2015
Short description: | p2@SNORA52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNORA52_5end |
Coexpression cluster: | C229_Mesenchymal_CD4_Melanocyte_acute_skeletal_left_heart |
Association with transcript: | 0bp_to_ENST00000362915, NR_002585, uc001lrs.1_5end |
EntrezGene: | SNORA52 |
HGNC: | 32645 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.33e-15 | 11 |
osteoprogenitor cell | 2.33e-15 | 11 |
mesenchyme condensation cell | 2.33e-15 | 11 |
subcutaneous fat cell | 1.40e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 1.40e-14 | 3 |
adipose tissue | 2.00e-12 | 14 |
hypodermis | 2.74e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 5.70e-21 | 2 |
carcinosarcoma | 5.70e-21 | 2 |