FFCP PHASE1:Hg19::chr18:19761421..19761434,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:19761421..19761434,+ | |||
|description=CAGE_peak_at_chr18:19761421..19761434,+ | |description=CAGE_peak_at_chr18:19761421..19761434,+ | ||
|id=chr18:19761421..19761434,+ | |id=chr18:19761421..19761434,+ | ||
|ontology_enrichment_celltype=CL:0000187!2.91e-07!54;CL:0000192!4.87e-07!42;CL:0000514!4.87e-07!42;CL:0000222!5.79e-07!119;CL:0000359!5.85e-07!32;CL:0000680!6.77e-07!57;CL:0000056!6.77e-07!57;CL:0000355!6.77e-07!57;CL:0000183!7.56e-07!59 | |ontology_enrichment_celltype=CL:0000187!2.91e-07!54;CL:0000192!4.87e-07!42;CL:0000514!4.87e-07!42;CL:0000222!5.79e-07!119;CL:0000359!5.85e-07!32;CL:0000680!6.77e-07!57;CL:0000056!6.77e-07!57;CL:0000355!6.77e-07!57;CL:0000183!7.56e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002622;2.98e-09;3!CL:1000306;2.58e-07;4!CL:0002547;2.58e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002622,4.72e-09,3;CL:1000306,5.54e-07,4;CL:0002547,5.54e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.25e-09;3!DOID:127;1.25e-09;3!DOID:2394;1.85e-07;14!DOID:0060072;2.58e-07;4!DOID:114;2.79e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,4.56e-10,3;DOID:127,4.56e-10,3;DOID:0060072,1.22e-07,4;DOID:2394,1.74e-07,14;DOID:114,2.53e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0003914!3.47e-16!118;UBERON:0004872!1.47e-13!84;UBERON:0000490!1.23e-11!138;UBERON:0001637!1.92e-11!42;UBERON:0003509!1.92e-11!42;UBERON:0004572!1.92e-11!42;UBERON:0001981!5.62e-11!60;UBERON:0007500!5.62e-11!60;UBERON:0004537!5.62e-11!60;UBERON:0006965!5.62e-11!60;UBERON:0001009!1.65e-10!113;UBERON:0004535!8.52e-10!110;UBERON:0002049!1.85e-09!79;UBERON:0007798!1.85e-09!79;UBERON:0000055!9.60e-09!69;UBERON:0007100!1.52e-08!27;UBERON:0000948!1.06e-07!24;UBERON:0005498!1.06e-07!24;UBERON:0004140!1.06e-07!24;UBERON:0009881!1.06e-07!24;UBERON:0004141!1.06e-07!24;UBERON:0003084!1.06e-07!24;UBERON:0007005!1.06e-07!24;UBERON:0004139!1.06e-07!24;UBERON:0004291!1.06e-07!24;UBERON:0002385!1.24e-07!63;UBERON:0001015!1.24e-07!63;UBERON:0000383!1.24e-07!63;UBERON:0003104!1.45e-07!238;UBERON:0009142!1.45e-07!238;UBERON:0004921!2.71e-07!129;UBERON:0004185!2.71e-07!129;UBERON:0001048!2.71e-07!168;UBERON:0004573!3.51e-07!33;UBERON:0004571!3.51e-07!33;UBERON:0001134!6.84e-07!61;UBERON:0002036!6.84e-07!61;UBERON:0003082!6.84e-07!61 | |ontology_enrichment_uberon=UBERON:0003914!3.47e-16!118;UBERON:0004872!1.47e-13!84;UBERON:0000490!1.23e-11!138;UBERON:0001637!1.92e-11!42;UBERON:0003509!1.92e-11!42;UBERON:0004572!1.92e-11!42;UBERON:0001981!5.62e-11!60;UBERON:0007500!5.62e-11!60;UBERON:0004537!5.62e-11!60;UBERON:0006965!5.62e-11!60;UBERON:0001009!1.65e-10!113;UBERON:0004535!8.52e-10!110;UBERON:0002049!1.85e-09!79;UBERON:0007798!1.85e-09!79;UBERON:0000055!9.60e-09!69;UBERON:0007100!1.52e-08!27;UBERON:0000948!1.06e-07!24;UBERON:0005498!1.06e-07!24;UBERON:0004140!1.06e-07!24;UBERON:0009881!1.06e-07!24;UBERON:0004141!1.06e-07!24;UBERON:0003084!1.06e-07!24;UBERON:0007005!1.06e-07!24;UBERON:0004139!1.06e-07!24;UBERON:0004291!1.06e-07!24;UBERON:0002385!1.24e-07!63;UBERON:0001015!1.24e-07!63;UBERON:0000383!1.24e-07!63;UBERON:0003104!1.45e-07!238;UBERON:0009142!1.45e-07!238;UBERON:0004921!2.71e-07!129;UBERON:0004185!2.71e-07!129;UBERON:0001048!2.71e-07!168;UBERON:0004573!3.51e-07!33;UBERON:0004571!3.51e-07!33;UBERON:0001134!6.84e-07!61;UBERON:0002036!6.84e-07!61;UBERON:0003082!6.84e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.58e-07;4!UBERON:0000415;2.58e-07;4!UBERON:0007240;2.58e-07;4!UBERON:0005742;2.58e-07;4!UBERON:0005734;2.58e-07;4!UBERON:0004664;2.58e-07;4!UBERON:0004663;2.58e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.16e-08,117;UBERON:0001637,1.07e-07,42;UBERON:0003509,1.07e-07,42;UBERON:0004572,1.07e-07,42;UBERON:0007100,2.87e-07,27;UBERON:0001009,2.93e-07,112;UBERON:0004872,4.29e-07,83;UBERON:0000415,5.54e-07,4;UBERON:0007240,5.54e-07,4;UBERON:0005742,5.54e-07,4;UBERON:0005734,5.54e-07,4;UBERON:0004664,5.54e-07,4;UBERON:0004663,5.54e-07,4 | |||
|phase1_expression=0.54503513781167,0,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0.737201809504527,2.79120467188971,0,0,0,0,0,0,0.730310090387373,0,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0.30120591877825,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0.361439152384566,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,1.10864698731282,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,1.6507082516404,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0,1.98788780678127,0.886413581652058,1.05927344650575,2.58152958673932,1.06400514659507,0,0,1.2333377420858,0,1.21239604862719,0.326923806226917,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,2.87447256726495,0,0,0,0,0,0,0.567160915800105,0,0,0,0,0,0.257640540045629,0,0.168776332241266,0.389748020644795,0,0,0.646584227275248,0,0,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0,0,0.404493924480493,0.392442930250692,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0.982827216677626,0,0,1.35287282397425,0.171567810298526,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,1.14382394926518,1.08524321078289,0,0,0.355391948742546,0,0.301439377059586,0,3.59902768255405,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.234282829985426,0,0,0,0,0.553107505625109,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0.561320188866147,1.02511319404561,0,1.60853921143608,1.48418066444991,0.462629081407967,1.24293207719189,0.246381468041427,1.03850885836724,0.581051892299796,1.45031339509947,0,0,1.95184561879831,1.0925470080403,1.04899531967539,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,1.31205858279882,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0.267096106940212,0.330569830721956,0.192190067365106,0,0.10115778085555,6.507837690162,2.20368642781448,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.38126038784765,0,0.855877976067841,0.95460974377781,0.78494864019923,0.179872457583315,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0,1.94970791705028,1.05650146756755,0,2.40389234321312,3.39024349860728,0,3.3171948762061,0.438450885253763,0,0.655894752046633,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.392996164052485,1.07001315444375,0,1.05553817648832,2.30506425071931,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,1.59398390600856,0,0,0.102268682502155,0,0.622079175323615,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.455768223388005,0.46112780877612,0.718061155278177,1.84700532267414,0,0.457987967009312,0.533034776018635,0,0,0.166211681900156,0,0,0,0,0,0.421996129056054,0,1.13082457147153,0,0,0.265372693510018,1.83309043480088,0,0,0.208843899010911,0.067401132980677,0.802577647298789,0,0,0,0,0,1.20990716048664,0,0.126373159256976,0.150323419414493,0.414752765588989,0,0,0.313932918407225,0,0,0,0.520679215005393,0.0979923974143777,0,0.17472666824203,0,0.387025325156341,0.438535902517113,0.164230914106418,0,0,0.451961481561065,0.137041924646751,0,0,0,0.0801588202515337,1.28071796843612,0.39961921916426,0.576361668616424,0.229073192331831,0,0.14405479798815,0,0,0,0,0.305994652908965,0.577901179803038,0,0,0,0.859530882839914,0,0.279282401272254,0.458320848023367,0.717873024576814,1.39775300349294,5.15071257763885,0,1.47803639470798,1.44119953416961,0,0.0787831823072236,0.0824158583811665,0,0.492137407573744,0,0,0,0.160753148465019,0,0,0,0,0,0.335434687599266,0.236417121897595,0.157363764404994,0,0,0.383830394638891,1.42939065274673,1.32418394073086,0,2.17199840701485,1.72844298240254,1.95952416065645,0,0,0,0.226624183040251,0.146552233678082,1.32506888912221,0,0,0,0,0.106787412567695,0.157204305099666,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,3.05845565607623,0,0,0.447764408660622,0,0.554805861502613,0,0.754703705257725,0.889811221596536,0.457680136793847,1.20984739010591,0.932623203496683,0.443565449968902,1.27437413730962,0,0.465788870628778,1.65882483136342,2.12673371646396,0,3.75644022493046,2.66563648518157,0.813741466409323,0.1818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| ||
|short_description=p@chr18:19761421..19761434,+ | |short_description=p@chr18:19761421..19761434,+ | ||
}} | }} |
Latest revision as of 23:54, 25 July 2015
Short description: | p@chr18:19761421..19761434, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:19761421..19761434, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate stromal cell | 4.72e-09 | 3 |
fibroblast of tunica adventitia of artery | 5.54e-07 | 4 |
fibroblast of the aortic adventitia | 5.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.16e-08 | 117 |
artery | 1.07e-07 | 42 |
arterial blood vessel | 1.07e-07 | 42 |
arterial system | 1.07e-07 | 42 |
primary circulatory organ | 2.87e-07 | 27 |
circulatory system | 2.93e-07 | 112 |
splanchnic layer of lateral plate mesoderm | 4.29e-07 | 83 |
artery wall | 5.54e-07 | 4 |
tunica adventitia of artery | 5.54e-07 | 4 |
adventitia | 5.54e-07 | 4 |
tunica adventitia of blood vessel | 5.54e-07 | 4 |
aorta tunica adventitia | 5.54e-07 | 4 |
aorta wall | 5.54e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 4.56e-10 | 3 |
leiomyoma | 4.56e-10 | 3 |
benign neoplasm | 1.22e-07 | 4 |
ovarian cancer | 1.74e-07 | 14 |
heart disease | 2.53e-07 | 2 |