FFCP PHASE1:Hg19::chr2:197041044..197041058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9262 | |EntrezGene=9262 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11396 | |HGNC=11396 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZJ1 | |UniProt=C9JZJ1 | ||
|association_with_transcript=0bp_to_ENST00000420683_5end | |association_with_transcript=0bp_to_ENST00000420683_5end | ||
|cluster_id=chr2:197041044..197041058,- | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_7_at_STK17B_5end | |description=CAGE_peak_7_at_STK17B_5end | ||
|id=chr2:197041044..197041058,- | |id=chr2:197041044..197041058,- | ||
|ontology_enrichment_celltype=CL:0000945!1.89e-70!24;CL:0000826!1.89e-70!24;CL:0000236!7.53e-43!14;CL:0000542!1.67e-40!53;CL:0000051!1.67e-40!53;CL:0000838!3.93e-38!52;CL:0002087!1.98e-21!119;CL:0002031!2.57e-17!124;CL:0000738!4.39e-17!140;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!2.59e-12!165;CL:0000837!2.59e-12!165;CL:0000988!1.96e-11!182;CL:0000817!2.19e-11!3;CL:0000785!1.80e-08!2;CL:0000955!1.80e-08!2;CL:0000818!1.80e-08!2;CL:0000954!1.80e-08!2;CL:0000816!1.80e-08!2 | |ontology_enrichment_celltype=CL:0000945!1.89e-70!24;CL:0000826!1.89e-70!24;CL:0000236!7.53e-43!14;CL:0000542!1.67e-40!53;CL:0000051!1.67e-40!53;CL:0000838!3.93e-38!52;CL:0002087!1.98e-21!119;CL:0002031!2.57e-17!124;CL:0000738!4.39e-17!140;CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0002032!2.59e-12!165;CL:0000837!2.59e-12!165;CL:0000988!1.96e-11!182;CL:0000817!2.19e-11!3;CL:0000785!1.80e-08!2;CL:0000955!1.80e-08!2;CL:0000818!1.80e-08!2;CL:0000954!1.80e-08!2;CL:0000816!1.80e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.50e-95;24!CL:0000236;1.25e-63;13!CL:0000542;1.19e-28;53!CL:0000946;1.32e-11;1!CL:0000786;1.32e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.06e-95,24;CL:0000826,3.06e-95,24;CL:0000236,1.18e-72,14;CL:0000838,6.14e-43,52;CL:0000542,4.32e-42,53;CL:0000051,4.32e-42,53;CL:0002087,4.20e-18,115;CL:0002031,2.89e-17,120;CL:0000738,5.40e-15,136;CL:0002032,2.45e-12,161;CL:0000837,2.45e-12,161;CL:0000037,9.84e-12,168;CL:0000946,1.47e-11,1;CL:0000786,1.47e-11,1;CL:0000980,1.47e-11,1;CL:0000988,5.02e-11,177 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-28;53!UBERON:0001045;3.64e-12;1!UBERON:0004872;6.58e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!3.46e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.31e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.31e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!2.06e-08!7;UBERON:0000341!5.95e-08!2;UBERON:0007023!1.63e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;3.64e-12;1!UBERON:0001154;3.64e-12;1!UBERON:0001153;3.64e-12;1!UBERON:0009854;3.64e-12;1!UBERON:0001961;3.64e-12;1!UBERON:0001744;3.64e-12;1!UBERON:0001042;3.64e-12;1!UBERON:0001735;3.64e-12;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001154,3.27e-12,1;UBERON:0001153,3.27e-12,1;UBERON:0001045,3.27e-12,1;UBERON:0002372,3.65e-12,1;UBERON:0001961,3.65e-12,1;UBERON:0001744,3.65e-12,1;UBERON:0001735,3.65e-12,1 | |||
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| ||
|short_description=p7@STK17B | |short_description=p7@STK17B | ||
}} | }} |
Latest revision as of 06:39, 19 September 2015
Short description: | p7@STK17B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_STK17B_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 0bp_to_ENST00000420683_5end |
EntrezGene: | STK17B |
HGNC: | 11396 |
UniProt: | C9JZJ1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.06e-95 | 24 |
pro-B cell | 3.06e-95 | 24 |
B cell | 1.18e-72 | 14 |
lymphoid lineage restricted progenitor cell | 6.14e-43 | 52 |
lymphocyte | 4.32e-42 | 53 |
common lymphoid progenitor | 4.32e-42 | 53 |
nongranular leukocyte | 4.20e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.89e-17 | 120 |
leukocyte | 5.40e-15 | 136 |
hematopoietic oligopotent progenitor cell | 2.45e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.45e-12 | 161 |
hematopoietic stem cell | 9.84e-12 | 168 |
antibody secreting cell | 1.47e-11 | 1 |
plasma cell | 1.47e-11 | 1 |
plasmablast | 1.47e-11 | 1 |
hematopoietic cell | 5.02e-11 | 177 |
Ontology term | p-value | n |
---|---|---|
vermiform appendix | 3.27e-12 | 1 |
caecum | 3.27e-12 | 1 |
midgut | 3.27e-12 | 1 |
tonsil | 3.65e-12 | 1 |
mucosa-associated lymphoid tissue | 3.65e-12 | 1 |
lymphoid tissue | 3.65e-12 | 1 |
tonsillar ring | 3.65e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.31e-10 | 10 |