FFCP PHASE1:Hg19::chr12:10854646..10854658,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:10854646..10854658,-
|short_description=p24@CSDA
|description=CAGE_peak_24_at_CSDA_5end
|association_with_transcript=311bp_to_ENST00000366290_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=311bp_to_ENST00000366290_5end | |||
|cluster_id=chr12:10854646..10854658,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_24_at_CSDA_5end | |||
|id=chr12:10854646..10854658,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.87e-07;2!CL:0000558;1.87e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.25e-07,2;CL:0000765,2.25e-07,2;CL:0000050,2.25e-07,2;CL:0000038,2.25e-07,2;CL:0000558,2.25e-07,2;CL:0000547,2.25e-07,2;CL:0000549,2.25e-07,2;CL:0000550,2.25e-07,2;CL:0000552,2.25e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.63e-09!15;UBERON:0000179!1.63e-09!15;UBERON:0000463!1.63e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.83e-53;15!UBERON:0000179;7.83e-53;15!UBERON:0000463;7.83e-53;15!UBERON:0005090;1.85e-25;2!UBERON:0001630;1.85e-25;2!UBERON:0002390;4.35e-23;32!UBERON:0001389;1.25e-13;1!UBERON:0000026;1.25e-13;1!UBERON:0008784;1.25e-13;1!UBERON:0006058;1.25e-13;1!UBERON:0002426;1.25e-13;1!UBERON:0003831;1.25e-13;1!UBERON:0003898;1.25e-13;1!UBERON:0004830;1.25e-13;1!UBERON:0003663;1.25e-13;1!UBERON:0004256;1.25e-13;1!UBERON:0004708;1.25e-13;1!UBERON:0002101;1.25e-13;1!UBERON:0004709;1.25e-13;1!UBERON:0003830;1.25e-13;1!UBERON:0005175;1.25e-13;1!UBERON:0002529;1.25e-13;1!UBERON:0010538;1.25e-13;1!UBERON:0003661;1.25e-13;1!UBERON:0010890;1.25e-13;1!UBERON:0002471;1.25e-13;1!UBERON:0001774;1.25e-13;1!UBERON:0001383;1.25e-13;1!UBERON:0010758;1.25e-13;1!UBERON:0010707;1.25e-13;1!UBERON:0001103;1.25e-13;1!UBERON:0000978;1.25e-13;1!UBERON:0002103;1.25e-13;1!UBERON:0001665;1.25e-13;1!UBERON:0003823;1.25e-13;1!UBERON:0000154;1.25e-13;1!UBERON:0010709;1.25e-13;1!UBERON:0002193;3.26e-13;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.41e-53,15;UBERON:0000179,6.41e-53,15;UBERON:0000463,6.41e-53,15;UBERON:0005090,9.87e-26,2;UBERON:0001630,9.87e-26,2;UBERON:0005418,7.55e-14,1;UBERON:0001389,7.55e-14,1;UBERON:0000026,7.55e-14,1;UBERON:0008784,7.55e-14,1;UBERON:0006058,7.55e-14,1;UBERON:0003663,7.55e-14,1;UBERON:0004256,7.55e-14,1;UBERON:0004708,7.55e-14,1;UBERON:0002101,7.55e-14,1;UBERON:0004709,7.55e-14,1;UBERON:0002529,7.55e-14,1;UBERON:0010538,7.55e-14,1;UBERON:0003661,7.55e-14,1;UBERON:0010890,7.55e-14,1;UBERON:0002471,7.55e-14,1;UBERON:0001383,7.55e-14,1;UBERON:0004357,7.55e-14,1;UBERON:0004347,7.55e-14,1;UBERON:0005420,7.55e-14,1;UBERON:0005732,7.55e-14,1;UBERON:0010758,7.55e-14,1;UBERON:0010707,7.55e-14,1;UBERON:0000978,7.55e-14,1;UBERON:0002103,7.55e-14,1;UBERON:0001665,7.55e-14,1;UBERON:0003823,7.55e-14,1;UBERON:0000154,7.55e-14,1;UBERON:0010709,7.55e-14,1;UBERON:0005733,7.55e-14,1;UBERON:0005730,7.55e-14,1;UBERON:0002426,1.10e-13,1;UBERON:0003831,1.10e-13,1;UBERON:0003898,1.10e-13,1;UBERON:0004830,1.10e-13,1;UBERON:0003830,1.10e-13,1;UBERON:0005175,1.10e-13,1;UBERON:0001774,1.10e-13,1;UBERON:0001103,1.10e-13,1;UBERON:0010084,1.10e-13,1;UBERON:0007023,5.87e-12,114;UBERON:0002390,2.83e-09,98;UBERON:0003061,2.83e-09,98;UBERON:0002193,2.52e-08,108 | |||
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| ||
|short_description=p24@CSDA | |||
}} | }} |
Latest revision as of 04:13, 16 September 2015
Short description: | p24@CSDA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_24_at_CSDA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 311bp_to_ENST00000366290_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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erythroid lineage cell | 2.25e-07 | 2 |
erythroblast | 2.25e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.25e-07 | 2 |
erythroid progenitor cell | 2.25e-07 | 2 |
reticulocyte | 2.25e-07 | 2 |
proerythroblast | 2.25e-07 | 2 |
basophilic erythroblast | 2.25e-07 | 2 |
polychromatophilic erythroblast | 2.25e-07 | 2 |
orthochromatic erythroblast | 2.25e-07 | 2 |