FFCP PHASE1:Hg19::chr12:10875351..10875422,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:10875351..10875422,-
|short_description=p4@CSDA
|description=CAGE_peak_4_at_CSDA_5end
|association_with_transcript=-356bp_to_ENST00000540747_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8531 | |EntrezGene=8531 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |HGNC=2428 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-356bp_to_ENST00000540747_5end | |||
|cluster_id=chr12:10875351..10875422,- | |||
|description=CAGE_peak_4_at_CSDA_5end | |||
|id=chr12:10875351..10875422,- | |||
|ontology_enrichment_celltype=CL:0000012!5.22e-22!682;CL:0000548!6.30e-21!679;CL:0000004!6.30e-21!679;CL:0000255!6.30e-21!679;CL:0000144!1.47e-17!625;CL:0002371!2.35e-17!591;CL:0000063!9.89e-16!578;CL:0000003!2.94e-14!722;CL:0000066!6.37e-07!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000076,1.96e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!8.84e-08!95;UBERON:0001637!1.28e-07!42;UBERON:0003509!1.28e-07!42;UBERON:0004572!1.28e-07!42;UBERON:0000486!1.55e-07!82;UBERON:0001009!1.62e-07!113;UBERON:0000055!2.45e-07!69;UBERON:0000926!3.37e-07!448;UBERON:0004120!3.37e-07!448;UBERON:0006603!3.37e-07!448;UBERON:0004535!3.37e-07!110;UBERON:0000914!4.30e-07!83;UBERON:0002329!4.30e-07!83;UBERON:0003077!4.30e-07!83;UBERON:0003059!4.30e-07!83;UBERON:0007282!4.30e-07!83;UBERON:0009618!4.30e-07!83;UBERON:0007285!4.30e-07!83;UBERON:0004290!4.65e-07!70 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,4.06e-08,99;UBERON:0001637,7.02e-08,42;UBERON:0003509,7.02e-08,42;UBERON:0004572,7.02e-08,42;UBERON:0000055,2.28e-07,68 | |||
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| ||
|short_description=p4@CSDA | |||
}} | }} |
Latest revision as of 04:36, 16 September 2015
Short description: | p4@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSDA_5end |
Coexpression cluster: | NA |
Association with transcript: | -356bp_to_ENST00000540747_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
squamous epithelial cell | 1.96e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
surface structure | 4.06e-08 | 99 |
artery | 7.02e-08 | 42 |
arterial blood vessel | 7.02e-08 | 42 |
arterial system | 7.02e-08 | 42 |
vessel | 2.28e-07 | 68 |