FFCP PHASE1:Hg19::chr18:61170700..61170711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:61170700..61170711,+ | |||
|description=CAGE_peak_at_chr18:61170700..61170711,+ | |description=CAGE_peak_at_chr18:61170700..61170711,+ | ||
|id=chr18:61170700..61170711,+ | |id=chr18:61170700..61170711,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.58e-25!43;CL:0000066!1.26e-20!254;CL:0000223!1.81e-18!59;CL:0002368!8.51e-15!13;CL:0002251!3.94e-13!21;CL:0002150!5.07e-11!3;CL:0000861!5.07e-11!3;CL:0002328!8.57e-11!3;CL:0002202!5.52e-09!9;CL:0002632!5.52e-09!9;CL:0002327!5.23e-08!4 | |ontology_enrichment_celltype=CL:0002076!7.58e-25!43;CL:0000066!1.26e-20!254;CL:0000223!1.81e-18!59;CL:0002368!8.51e-15!13;CL:0002251!3.94e-13!21;CL:0002150!5.07e-11!3;CL:0000861!5.07e-11!3;CL:0002328!8.57e-11!3;CL:0002202!5.52e-09!9;CL:0002632!5.52e-09!9;CL:0002327!5.23e-08!4 | ||
|ontology_enrichment_celltype_v019=CL:0002623;8.11e-28;3!CL:0002328;3.11e-27;3!CL:0000622;3.95e-17;5!CL:0000154;1.90e-14;6!CL:0000150;5.93e-10;9!CL:0002202;9.23e-10;9!CL:0002632;9.23e-10;9!CL:0002076;2.43e-09;42!CL:0002231;6.56e-08;3!CL:0002368;4.95e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.12e-28,3;CL:0002328,2.72e-27,3;CL:0000622,3.95e-17,5;CL:0000154,1.90e-14,6;CL:0002076,5.37e-12,42;CL:0000150,5.93e-10,9;CL:0002202,8.84e-10,9;CL:0002632,8.84e-10,9;CL:0000223,1.03e-08,58;CL:0002231,7.26e-08,3;CL:0002368,4.81e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.08e-11!106;DOID:0050687!6.11e-08!143;DOID:1749!5.75e-07!14 | |ontology_enrichment_disease=DOID:305!1.08e-11!106;DOID:0050687!6.11e-08!143;DOID:1749!5.75e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:3151;4.66e-21;1!DOID:3149;4.66e-21;1!DOID:3451;3.18e-11;2!DOID:4159;3.18e-11;2!DOID:0060122;3.18e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,9.43e-21,1;DOID:3149,9.43e-21,1;DOID:3451,4.52e-11,2;DOID:4159,4.52e-11,2;DOID:0060122,4.52e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.15e-31!72;UBERON:0001737!3.58e-27!9;UBERON:0000065!1.26e-25!53;UBERON:0000072!2.07e-22!46;UBERON:0001557!1.88e-21!19;UBERON:0004119!6.37e-21!169;UBERON:0000925!6.37e-21!169;UBERON:0006595!6.37e-21!169;UBERON:0008947!6.75e-20!38;UBERON:0003258!6.75e-20!38;UBERON:0001007!7.20e-17!155;UBERON:0001555!7.20e-17!155;UBERON:0007026!7.20e-17!155;UBERON:0001041!4.96e-15!98;UBERON:0003729!7.51e-15!5;UBERON:0000166!5.20e-13!21;UBERON:0000077!5.66e-13!130;UBERON:0004921!5.66e-13!129;UBERON:0004185!5.66e-13!129;UBERON:0000161!2.72e-12!35;UBERON:0003343!7.07e-12!4;UBERON:0004785!7.07e-12!4;UBERON:0000165!2.43e-11!28;UBERON:0000930!2.43e-11!28;UBERON:0004815!8.57e-11!3;UBERON:0002031!8.57e-11!3;UBERON:0001723!3.99e-10!3;UBERON:0001033!3.99e-10!3;UBERON:0010056!3.99e-10!3;UBERON:0005153!2.51e-08!37;UBERON:0002185!3.48e-08!4;UBERON:0000063!4.92e-08!97;UBERON:0001911!5.23e-08!4;UBERON:0005333!5.23e-08!4;UBERON:0008425!5.23e-08!4;UBERON:0005311!5.23e-08!4;UBERON:0007196!1.14e-07!14;UBERON:0001558!1.14e-07!14;UBERON:0000974!3.21e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;3.11e-27;3!UBERON:0002031;3.11e-27;3!UBERON:0007029;4.66e-21;1!UBERON:0000014;1.04e-20;4!UBERON:0002185;8.81e-17;5!UBERON:0001044;1.90e-14;6!UBERON:0003293;1.90e-14;6!UBERON:0003294;1.90e-14;6!UBERON:0010047;1.90e-14;6!UBERON:0003408;1.90e-14;6!UBERON:0000167;1.90e-14;6!UBERON:0000485;2.81e-12;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,2.72e-27,3;UBERON:0002031,2.72e-27,3;UBERON:0007029,4.22e-21,1;UBERON:0000014,1.41e-20,4;UBERON:0002185,8.14e-17,5;UBERON:0001044,1.90e-14,6;UBERON:0003293,1.90e-14,6;UBERON:0003294,1.90e-14,6;UBERON:0010047,1.90e-14,6;UBERON:0000167,1.90e-14,6;UBERON:0000485,8.84e-10,9;UBERON:0003408,4.75e-09,10;UBERON:0005153,6.19e-09,37;UBERON:0003102,3.94e-07,99;UBERON:0005157,4.27e-07,47 | |||
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| ||
|short_description=p@chr18:61170700..61170711,+ | |short_description=p@chr18:61170700..61170711,+ | ||
}} | }} |
Latest revision as of 01:51, 26 July 2015
Short description: | p@chr18:61170700..61170711, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:61170700..61170711, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.12e-28 | 3 |
bronchial epithelial cell | 2.72e-27 | 3 |
acinar cell | 3.95e-17 | 5 |
protein secreting cell | 1.90e-14 | 6 |
endo-epithelial cell | 5.37e-12 | 42 |
glandular epithelial cell | 5.93e-10 | 9 |
epithelial cell of tracheobronchial tree | 8.84e-10 | 9 |
epithelial cell of lower respiratory tract | 8.84e-10 | 9 |
endodermal cell | 1.03e-08 | 58 |
epithelial cell of prostate | 7.26e-08 | 3 |
respiratory epithelial cell | 4.81e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 2.72e-27 | 3 |
epithelium of bronchus | 2.72e-27 | 3 |
surface | 4.22e-21 | 1 |
zone of skin | 1.41e-20 | 4 |
bronchus | 8.14e-17 | 5 |
saliva-secreting gland | 1.90e-14 | 6 |
gland of oral region | 1.90e-14 | 6 |
gland of foregut | 1.90e-14 | 6 |
oral gland | 1.90e-14 | 6 |
oral cavity | 1.90e-14 | 6 |
simple columnar epithelium | 8.84e-10 | 9 |
gland of gut | 4.75e-09 | 10 |
epithelial bud | 6.19e-09 | 37 |
surface structure | 3.94e-07 | 99 |
epithelial fold | 4.27e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 9.43e-21 | 1 |
keratoacanthoma | 9.43e-21 | 1 |
skin carcinoma | 4.52e-11 | 2 |
skin cancer | 4.52e-11 | 2 |
integumentary system cancer | 4.52e-11 | 2 |