FFCP PHASE1:Hg19::chr19:18682531..18682565,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7311 | |EntrezGene=7311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12458 | |HGNC=12458 | ||
|TSSclassifier=strong | |||
|UniProt=P62987,Q3MIH3,Q7Z4P3 | |UniProt=P62987,Q3MIH3,Q7Z4P3 | ||
|association_with_transcript=-48bp_to_ENST00000430157,ENST00000442744,NM_001033930,NM_003333,uc002njr.2,uc002njs.2_5end | |association_with_transcript=-48bp_to_ENST00000430157,ENST00000442744,NM_001033930,NM_003333,uc002njr.2,uc002njs.2_5end | ||
|cluster_id=chr19:18682531..18682565,+ | |||
|description=CAGE_peak_5_at_UBA52_5end | |description=CAGE_peak_5_at_UBA52_5end | ||
|id=chr19:18682531..18682565,+ | |id=chr19:18682531..18682565,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;1.58e-09;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.08e-08!286;UBERON:0000481!4.73e-08!347;UBERON:0007023!1.05e-07!115;UBERON:0000489!1.06e-07!32;UBERON:0003075!1.63e-07!86;UBERON:0007284!1.63e-07!86;UBERON:0000483!1.78e-07!309;UBERON:0000119!3.20e-07!312;UBERON:0002346!5.76e-07!90;UBERON:0003103!6.53e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;8.57e-09;24!UBERON:0011143;8.57e-09;24!UBERON:0000489;2.23e-08;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.75e-08,26;UBERON:0003918,8.75e-08,26;UBERON:0011143,8.75e-08,26;UBERON:0005095,8.75e-08,26;UBERON:0007687,8.75e-08,26;UBERON:0000489,1.48e-07,31;UBERON:0005172,4.68e-07,54;UBERON:0005173,4.68e-07,54 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0,0.491467873003018,2.79120467188971,0,0,0,0,0,0,0,0,0.246242116153576,0.816002764977012,0.940364164434263,0.85870796139317,0.273748850145768,0.87879847716362,0.305653622991805,0,0.236132343941038,0,0,0,0.919421224478927,1.50602959389125,0,0.154934401160603,0.426507697462265,0.587200878669695,0,0,0,0.447830948479849,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0.196709770113833,0.393010762749165,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0,0,0,0,0.276350017785848,0,0.444859689486181,0,0,0,0.383220493601921,0,0.253019692019503,0,1.30216690771284,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.579297615531196,0,0,0.255725123687061,0,0,0.144846518960824,0,0.973269740605272,1.79616152611729,1.99556457716308,0.527008714158756,0.523916301990851,0.364295288292542,0,0,0,0,0.238490624305342,0,0.74291500265913,0.39752481473341,0.860234595106124,0,0,0,0.550236083880135,0,0.258416759169329,0.35576626268671,0,0,0,0,0.367663080345869,1.62028389576352,0.267899184852239,0.22452937262617,0.337834441449967,3.06633274931766,0,0.183201743930407,0,0,0.436094052142534,0,0.379891534993739,0.397227542439656,0,1.06400514659507,1.12135520028461,0,1.97334038733728,0.311211035399766,0,0.326923806226917,0.151357427644931,0,0.234321431833797,0.312160076830321,0.570471821544449,0,0.352303495931295,0.323745888736263,0.561803226808994,0,0.122834317311768,0,0,0.494533858557114,0,0.718618141816238,0.505008341862199,0.375355559615893,0,0,0,0.150238058906597,0.567160915800105,0.179389635688862,0.85422955527427,0.423863802319124,0,0.515262646192195,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.460249493211497,1.2931684545505,0,0.201504196455281,0,0.193260853163297,0,0.860413786167011,0,0.397589304964456,0.232387885739037,0,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0.236613600079688,0.505754070234305,0.964044119533928,0.992645754591546,0.435758888184812,0.237270619111097,1.07865046528132,0.196221465125346,0.769494313892781,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.737930631258681,1.02940686179115,0,0,0,0,0,1.03993478527958,0,1.04337364477569,0.469634776943287,0.433099343283221,0.925971025153221,0.380508304469197,0,0.858486162094873,0,0.234004265139238,0,0,0.16798212819886,0.567100388969546,0.0895585227028483,0.290633938513962,1.15014803749563,0,0,0.207328115540772,0.288239906833923,0.12624243342638,0.126995788584338,0.381988425558278,0,0,0.205654985406647,1.20137223137567,0,0.112131084345361,0,0.1466765716419,0.646358578788889,3.57656445851882,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0.904318131178758,0.871533458600294,0.299918973546171,0,0,0,0.718874566474748,1.14861935834114,1.42636905040718,0.144781306667579,0.205476322550383,0.358121926479791,0,0,0,0,0.508189248444927,0,0.773288812777695,0.335032530668698,1.27587750330633,0,0,0,0.12269149171914,0,0,0.415941723061614,0.178428988797162,0.473107245101804,0.35142424497814,0.601892199455438,2.27407504055985,0,0,0,0.173767228936166,0.587403472388222,0.343143423810856,0.206768026122887,0,0,2.12189300012382,0,0.30239029332968,0.744323423456331,0,0,0.512556597022804,0,0.64341568457443,0,0.771048469013278,0.177561725313127,0,0,0.464841513839837,0.846016147141356,0.200506470303285,0.184161977871793,0.34444334449382,0.364182336013434,0.524497659837696,0.902399225814824,0.616122696835318,3.13739907670742,2.92278449306521,0.316654886678627,1.13733384070897,0,0.215915916102139,0,0.541892875087706,0.501689773854853,1.52925763827023,3.3243040357149,0.671624264166535,0,0,0,0.656029291399411,0.325378394664303,0.515205058238611,0.183138929636687,0,0.574265537996172,0.650060246036521,0,0.48335359146061,0.462145851343933,0.460511024178389,0.275673144969061,0,0.290033387828457,0.255679882248303,0.0890320356467374,0,0.768760269460425,0,0.30347334256665,0.464845549297286,0,0,0,0.532306030317022,0,0.37064843820784,1.14499909393593,0,0,0.38126038784765,0,0.855877976067841,0.318203247925937,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0.409499734223957,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0.6196469961995,0,0.143411352204052,0,0,0.709522128141196,0.422215270595328,0.329294892959902,0.379473173765715,0.349934720244983,0.48111056362756,0,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0.648473311192717,0,0,0.320472213382419,2.88743956579008,0,0.185803175125719,1.00988449083511,0.142283686696828,0.318852545457645,0,0,0,0.649243880549111,0,0,0.313359791546046,0,0.338583555603207,0,0,0,1.37402137902306,0.307240764308458,0,0,0.781552381608161,0.278406173895242,2.46174797895425,0.540911356951966,0,0,0.18714054040822,0.439524537815682,0.121360521749513,0.111443384277478,0,0,0.890894042497916,0.307160702099232,0.994147647766298,0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| ||
|short_description=p5@UBA52 | |short_description=p5@UBA52 | ||
}} | }} |
Latest revision as of 16:53, 16 September 2015
Short description: | p5@UBA52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UBA52_5end |
Coexpression cluster: | NA |
Association with transcript: | -48bp_to_ENST00000430157, ENST00000442744, NM_001033930, NM_003333, uc002njr.2, uc002njs.2_5end |
EntrezGene: | UBA52 |
HGNC: | 12458 |
UniProt: | P62987Q3MIH3Q7Z4P3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney | 8.75e-08 | 26 |
kidney mesenchyme | 8.75e-08 | 26 |
upper urinary tract | 8.75e-08 | 26 |
kidney rudiment | 8.75e-08 | 26 |
kidney field | 8.75e-08 | 26 |
cavitated compound organ | 1.48e-07 | 31 |
abdomen element | 4.68e-07 | 54 |
abdominal segment element | 4.68e-07 | 54 |