FFCP PHASE1:Hg19::chr12:129304529..129304538,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:129304529..129304538,-
|short_description=p9@SLC15A4
|description=CAGE_peak_9_at_SLC15A4_5end
|association_with_transcript=-117bp_to_ENST00000535272_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121260 | |EntrezGene=121260 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23090 | |HGNC=23090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-117bp_to_ENST00000535272_5end | |||
|cluster_id=chr12:129304529..129304538,- | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_9_at_SLC15A4_5end | |||
|id=chr12:129304529..129304538,- | |||
|ontology_enrichment_celltype=CL:0000946!4.58e-11!1;CL:0000786!4.58e-11!1;CL:0000980!4.58e-11!1;CL:0000342!9.97e-11!1;CL:0002565!9.97e-11!1;CL:0000945!5.53e-10!24;CL:0000826!5.53e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.78e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.78e-09,24;CL:0000826,2.78e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.89e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!2.91e-29!3;UBERON:0005290!2.91e-29!3;UBERON:0010096!2.91e-29!3;UBERON:0002298!3.11e-19!8;UBERON:0004733!6.57e-13!12;UBERON:0002028!6.57e-13!12;UBERON:0007277!6.57e-13!12;UBERON:0004732!6.22e-12!13;UBERON:0003075!1.70e-11!86;UBERON:0007284!1.70e-11!86;UBERON:0005743!2.54e-11!86;UBERON:0002702!3.76e-11!1;UBERON:0002336!6.14e-11!1;UBERON:0001018!6.14e-11!1;UBERON:0002473!6.14e-11!1;UBERON:0005340!6.14e-11!1;UBERON:0002316!6.14e-11!1;UBERON:0003544!6.14e-11!1;UBERON:0001020!6.14e-11!1;UBERON:0005970!6.14e-11!1;UBERON:0002437!6.14e-11!1;UBERON:0002346!6.46e-11!90;UBERON:0002506!9.97e-11!1;UBERON:0001769!9.97e-11!1;UBERON:0003296!1.47e-10!4;UBERON:0010133!1.47e-10!4;UBERON:0003076!2.28e-10!15;UBERON:0003057!2.28e-10!15;UBERON:0000073!4.09e-10!94;UBERON:0001016!4.09e-10!94;UBERON:0007023!6.04e-10!115;UBERON:0001017!7.69e-10!82;UBERON:0000955!1.28e-09!69;UBERON:0006238!1.28e-09!69;UBERON:0001049!1.44e-09!57;UBERON:0005068!1.44e-09!57;UBERON:0006241!1.44e-09!57;UBERON:0007135!1.44e-09!57;UBERON:0002616!3.24e-09!59;UBERON:0000033!1.83e-07!123;UBERON:0000153!4.81e-07!129;UBERON:0007811!4.81e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.76e-18;3!UBERON:0001896;8.00e-18;3!UBERON:0005290;8.00e-18;3!UBERON:0004177;2.66e-11;5!UBERON:0005057;2.66e-11;5!UBERON:0002298;1.32e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.76e-18,3;UBERON:0004854,6.76e-18,3;UBERON:0009034,6.76e-18,3;UBERON:0002095,6.76e-18,3;UBERON:0004782,6.76e-18,3;UBERON:0003281,6.76e-18,3;UBERON:0009664,6.76e-18,3;UBERON:0002296,6.76e-18,3;UBERON:0005602,6.76e-18,3;UBERON:0001179,6.76e-18,3;UBERON:0006293,6.76e-18,3;UBERON:0001896,8.00e-18,3;UBERON:0005290,8.00e-18,3;UBERON:0010096,8.00e-18,3;UBERON:0002298,1.32e-09,6;UBERON:0004177,1.89e-08,7;UBERON:0005057,1.89e-08,7;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8 | |||
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|short_description=p9@SLC15A4 | |||
}} | }} |
Latest revision as of 07:38, 17 September 2015
Short description: | p9@SLC15A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC15A4_5end |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | -117bp_to_ENST00000535272_5end |
EntrezGene: | SLC15A4 |
HGNC: | 23090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.78e-09 | 24 |
pro-B cell | 2.78e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.76e-18 | 3 |
gastrointestinal system mesentery | 6.76e-18 | 3 |
stomach region | 6.76e-18 | 3 |
mesentery | 6.76e-18 | 3 |
gastrointestinal system serosa | 6.76e-18 | 3 |
mesentery of stomach | 6.76e-18 | 3 |
gut mesentery | 6.76e-18 | 3 |
dorsal mesentery | 6.76e-18 | 3 |
dorsal mesogastrium | 6.76e-18 | 3 |
peritoneal cavity | 6.76e-18 | 3 |
spleen primordium | 6.76e-18 | 3 |
medulla oblongata | 8.00e-18 | 3 |
myelencephalon | 8.00e-18 | 3 |
future myelencephalon | 8.00e-18 | 3 |
brainstem | 1.32e-09 | 6 |
hemopoietic organ | 1.89e-08 | 7 |
immune organ | 1.89e-08 | 7 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |