FFCP PHASE1:Hg19::chr3:127441452..127441489,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11343 | |EntrezGene=11343 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17038 | |HGNC=17038 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-39bp_to_ENST00000484451,ENST00000487473_5end | |association_with_transcript=-39bp_to_ENST00000484451,ENST00000487473_5end | ||
|cluster_id=chr3:127441452..127441489,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_20_at_MGLL_5end | |description=CAGE_peak_20_at_MGLL_5end | ||
|id=chr3:127441452..127441489,- | |id=chr3:127441452..127441489,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.74e-09;5!CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.60e-14;3!UBERON:0005062;3.60e-11;4!UBERON:0007284;3.60e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6!DOID:169;5.92e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6;DOID:169,5.92e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.05e-16!57;UBERON:0005068!3.05e-16!57;UBERON:0006241!3.05e-16!57;UBERON:0007135!3.05e-16!57;UBERON:0007023!1.28e-15!115;UBERON:0002616!1.52e-15!59;UBERON:0003075!9.54e-15!86;UBERON:0007284!9.54e-15!86;UBERON:0002346!7.55e-14!90;UBERON:0000073!1.11e-12!94;UBERON:0001016!1.11e-12!94;UBERON:0001017!1.84e-12!82;UBERON:0000955!2.03e-12!69;UBERON:0006238!2.03e-12!69;UBERON:0005743!1.15e-11!86;UBERON:0001872!6.82e-11!5;UBERON:0002780!1.34e-10!41;UBERON:0001890!1.34e-10!41;UBERON:0006240!1.34e-10!41;UBERON:0003080!2.75e-10!42;UBERON:0003056!4.80e-10!61;UBERON:0004733!9.51e-10!12;UBERON:0002028!9.51e-10!12;UBERON:0007277!9.51e-10!12;UBERON:0001893!3.84e-09!34;UBERON:0004732!6.04e-09!13;UBERON:0001950!7.87e-09!20;UBERON:0001905!1.65e-08!2;UBERON:0002757!1.65e-08!2;UBERON:0010134!1.65e-08!2;UBERON:0002784!1.65e-08!2;UBERON:0005408!1.65e-08!2;UBERON:0001899!1.65e-08!2;UBERON:0004121!1.66e-08!169;UBERON:0000924!3.62e-08!173;UBERON:0006601!3.62e-08!173;UBERON:0001869!4.68e-08!32;UBERON:0002619!5.96e-08!22;UBERON:0000153!6.33e-08!129;UBERON:0007811!6.33e-08!129;UBERON:0002791!7.86e-08!33;UBERON:0003076!1.16e-07!15;UBERON:0003057!1.16e-07!15;UBERON:0000033!1.28e-07!123;UBERON:0002020!1.49e-07!34;UBERON:0003528!1.49e-07!34;UBERON:0000956!6.90e-07!25;UBERON:0000203!6.90e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002135;2.70e-40;1!UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0002133;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0003978;1.96e-14;3!UBERON:0000946;1.96e-14;3!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000013;2.74e-09;5!UBERON:0002410;2.74e-09;5!UBERON:0002037;6.34e-08;6!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002135,3.30e-40,1;UBERON:0001905,5.70e-21,2;UBERON:0002757,5.70e-21,2;UBERON:0010134,5.70e-21,2;UBERON:0005408,5.70e-21,2;UBERON:0001899,5.70e-21,2;UBERON:0002133,6.96e-21,2;UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0003978,2.09e-14,3;UBERON:0009751,2.09e-14,3;UBERON:0000946,2.09e-14,3;UBERON:0002523,2.09e-14,3;UBERON:0005983,2.09e-14,3;UBERON:0002165,2.09e-14,3;UBERON:0002062,2.09e-14,3;UBERON:0007280,2.09e-14,3;UBERON:0003296,3.42e-11,4;UBERON:0010133,3.42e-11,4;UBERON:0002784,3.42e-11,4;UBERON:0000013,2.74e-09,5;UBERON:0002410,2.74e-09,5;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6;UBERON:0001894,6.04e-07,7;UBERON:0006222,6.04e-07,7;UBERON:0004797,6.39e-07,7 | |||
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| ||
|short_description=p20@MGLL | |short_description=p20@MGLL | ||
}} | }} |
Latest revision as of 05:29, 20 September 2015
Short description: | p20@MGLL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_MGLL_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -39bp_to_ENST00000484451, ENST00000487473_5end |
EntrezGene: | MGLL |
HGNC: | 17038 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mitral valve | 3.30e-40 | 1 |
pineal body | 5.70e-21 | 2 |
regional part of epithalamus | 5.70e-21 | 2 |
secretory circumventricular organ | 5.70e-21 | 2 |
circumventricular organ | 5.70e-21 | 2 |
epithalamus | 5.70e-21 | 2 |
atrioventricular valve | 6.96e-21 | 2 |
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
valve | 2.09e-14 | 3 |
cardiac mesenchyme | 2.09e-14 | 3 |
cardial valve | 2.09e-14 | 3 |
tunica intima | 2.09e-14 | 3 |
heart layer | 2.09e-14 | 3 |
endocardium | 2.09e-14 | 3 |
endocardial cushion | 2.09e-14 | 3 |
presumptive endocardium | 2.09e-14 | 3 |
gland of diencephalon | 3.42e-11 | 4 |
neuroendocrine gland | 3.42e-11 | 4 |
regional part of diencephalon | 3.42e-11 | 4 |
sympathetic nervous system | 2.74e-09 | 5 |
autonomic nervous system | 2.74e-09 | 5 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
diencephalon | 6.04e-07 | 7 |
future diencephalon | 6.04e-07 | 7 |
blood vessel layer | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |
neuroendocrine tumor | 5.92e-08 | 6 |