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FFCP PHASE1:Hg19::chr19:45116921..45116931,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=147710
|EntrezGene=147710
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=40040
|HGNC=40040
|TSSclassifier=strong
|UniProt=A1L1A6
|UniProt=A1L1A6
|association_with_transcript=-8bp_to_ENST00000402988,NM_001205280_5end
|association_with_transcript=-8bp_to_ENST00000402988,NM_001205280_5end
|cluster_id=chr19:45116921..45116931,+
|coexpression_cluster_id=C304
|description=CAGE_peak_3_at_IGSF23_5end
|description=CAGE_peak_3_at_IGSF23_5end
|id=chr19:45116921..45116931,+
|id=chr19:45116921..45116931,+
|ontology_enrichment_celltype=CL:0000181!3.85e-24!12;CL:0000417!3.85e-24!12;CL:0000668!3.85e-24!12;CL:0000414!3.85e-24!12;CL:0000412!3.85e-24!12;CL:0000182!3.85e-24!12;CL:0002563!1.97e-12!4;CL:0000223!5.16e-09!59;CL:0002253!5.60e-07!2
|ontology_enrichment_celltype=CL:0000181!3.85e-24!12;CL:0000417!3.85e-24!12;CL:0000668!3.85e-24!12;CL:0000414!3.85e-24!12;CL:0000412!3.85e-24!12;CL:0000182!3.85e-24!12;CL:0002563!1.97e-12!4;CL:0000223!5.16e-09!59;CL:0002253!5.60e-07!2
|ontology_enrichment_celltype_v019=CL:0000182;5.80e-07;12
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-07,12
|ontology_enrichment_development_v019=UBERON:0004161;2.04e-15;11!UBERON:0009497;3.78e-13;13
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002107!1.24e-29!19;UBERON:0006925!1.24e-29!19;UBERON:0008836!1.24e-29!19;UBERON:0008835!1.58e-25!22;UBERON:0003894!1.58e-25!22;UBERON:0009854!2.13e-24!23;UBERON:0007499!2.09e-22!25;UBERON:0009497!2.09e-22!25;UBERON:0000015!2.09e-22!25;UBERON:0002423!2.09e-22!25;UBERON:0006235!2.09e-22!25;UBERON:0004161!2.09e-22!25;UBERON:0005057!1.59e-21!26;UBERON:0009856!1.59e-21!26;UBERON:0000160!7.31e-20!27;UBERON:0002365!5.74e-18!31;UBERON:0002330!5.74e-18!31;UBERON:0003929!1.88e-16!54;UBERON:0002368!7.51e-16!35;UBERON:0004921!7.57e-16!129;UBERON:0004185!7.57e-16!129;UBERON:0005409!2.51e-15!35;UBERON:0001007!6.75e-13!155;UBERON:0001555!6.75e-13!155;UBERON:0007026!6.75e-13!155;UBERON:0001242!1.97e-12!4;UBERON:0001262!1.97e-12!4;UBERON:0004786!1.97e-12!4;UBERON:0004808!1.97e-12!4;UBERON:0001277!1.97e-12!4;UBERON:0001052!2.49e-12!4;UBERON:0000949!3.37e-12!45;UBERON:0004119!1.12e-11!169;UBERON:0000925!1.12e-11!169;UBERON:0006595!1.12e-11!169;UBERON:0005911!1.79e-10!82;UBERON:0003350!3.93e-10!5;UBERON:0000059!4.29e-10!11;UBERON:0004907!4.73e-10!5;UBERON:0005172!7.22e-10!55;UBERON:0005173!7.22e-10!55;UBERON:0002530!3.72e-09!59;UBERON:0002417!7.79e-09!61;UBERON:0000916!7.79e-09!61;UBERON:0002108!1.07e-07!14
|ontology_enrichment_uberon_v019=UBERON:0002108;5.34e-33;4!UBERON:0000160;2.15e-16;17!UBERON:0002107;1.49e-15;19!UBERON:0006925;1.49e-15;19!UBERON:0005409;6.49e-13;22!UBERON:0002423;6.56e-12;25!UBERON:0002365;1.39e-09;31!UBERON:0002330;1.39e-09;31!UBERON:0001007;7.23e-08;81!UBERON:0002368;1.02e-07;33!UBERON:0004921;1.33e-07;33!UBERON:0002114;2.47e-07;2
|ontology_enrichment_uberon_v019_2=UBERON:0002108,5.98e-33,4;UBERON:0000160,1.91e-16,17;UBERON:0002107,1.15e-15,19;UBERON:0006925,1.15e-15,19;UBERON:0008836,1.15e-15,19;UBERON:0008835,1.39e-13,22;UBERON:0003894,1.39e-13,22;UBERON:0009854,5.23e-13,23;UBERON:0007499,5.38e-12,25;UBERON:0009497,5.38e-12,25;UBERON:0000015,5.38e-12,25;UBERON:0002423,5.38e-12,25;UBERON:0006235,5.38e-12,25;UBERON:0004161,5.38e-12,25;UBERON:0009856,1.51e-11,26;UBERON:0005409,1.69e-11,25;UBERON:0002365,9.77e-10,31;UBERON:0002330,9.77e-10,31;UBERON:0004921,2.74e-09,118;UBERON:0002368,1.17e-08,35;UBERON:0001007,1.82e-07,145;UBERON:0001555,1.82e-07,145;UBERON:0007026,1.82e-07,145;UBERON:0002114,3.16e-07,2;UBERON:0000949,8.65e-07,45
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13345112812495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.32686346755009,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,0.659326867049332,0.606631894687664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46552233678082,1.32506888912221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31196068783506,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p3@IGSF23
|short_description=p3@IGSF23
}}
}}

Latest revision as of 13:30, 18 September 2015

Short description:p3@IGSF23
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_3_at_IGSF23_5end
Coexpression cluster:[[Coexpression cluster:C304|]]
Association with transcript: -8bp_to_ENST00000402988, NM_001205280_5end
EntrezGene:IGSF23
HGNC: 40040
UniProt: A1L1A6
Genome view:ZENBU


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CAGE Expression



0.00
0.25
0.50
0.75
1.00
1.25
1.50




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

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