FFCP PHASE1:Hg19::chr3:145940102..145940109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57088 | |EntrezGene=57088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16497 | |HGNC=16497 | ||
|TSSclassifier=strong | |||
|UniProt=C9J3P9 | |UniProt=C9J3P9 | ||
|association_with_transcript=48bp_to_ENST00000498625_5end | |association_with_transcript=48bp_to_ENST00000498625_5end | ||
|cluster_id=chr3:145940102..145940109,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_19_at_PLSCR4_5end | |description=CAGE_peak_19_at_PLSCR4_5end | ||
|id=chr3:145940102..145940109,- | |id=chr3:145940102..145940109,- | ||
|ontology_enrichment_celltype=CL:0000181!4.83e-21!12;CL:0000417!4.83e-21!12;CL:0000668!4.83e-21!12;CL:0000414!4.83e-21!12;CL:0000412!4.83e-21!12;CL:0000182!4.83e-21!12;CL:0005020!1.52e-08!6;CL:0002138!1.52e-08!6;CL:0005022!1.52e-08!6 | |ontology_enrichment_celltype=CL:0000181!4.83e-21!12;CL:0000417!4.83e-21!12;CL:0000668!4.83e-21!12;CL:0000414!4.83e-21!12;CL:0000412!4.83e-21!12;CL:0000182!4.83e-21!12;CL:0005020!1.52e-08!6;CL:0002138!1.52e-08!6;CL:0005022!1.52e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-30,12;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;6.30e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.29e-21!19;UBERON:0006925!3.29e-21!19;UBERON:0008836!3.29e-21!19;UBERON:0009497!1.70e-19!25;UBERON:0000015!1.70e-19!25;UBERON:0002423!1.70e-19!25;UBERON:0006235!1.70e-19!25;UBERON:0004161!1.70e-19!25;UBERON:0008835!4.21e-18!22;UBERON:0003894!4.21e-18!22;UBERON:0009854!3.02e-17!23;UBERON:0007499!9.69e-16!25;UBERON:0005057!4.49e-15!26;UBERON:0009856!4.49e-15!26;UBERON:0002365!2.18e-12!31;UBERON:0002330!2.18e-12!31;UBERON:0005177!1.15e-11!107;UBERON:0005172!2.01e-11!55;UBERON:0005173!2.01e-11!55;UBERON:0003127!4.05e-11!2;UBERON:0002368!8.56e-11!35;UBERON:0002417!4.60e-10!61;UBERON:0000916!4.60e-10!61;UBERON:0000949!6.96e-10!45;UBERON:0007023!3.82e-09!115;UBERON:0000077!6.45e-09!130;UBERON:0009569!2.49e-08!113;UBERON:0000466!3.92e-08!126;UBERON:0004111!4.76e-08!241;UBERON:0003929!5.00e-08!54;UBERON:0004921!8.64e-08!129;UBERON:0004185!8.64e-08!129;UBERON:0001041!1.96e-07!98;UBERON:0005911!7.73e-07!82;UBERON:0001007!7.81e-07!155;UBERON:0001555!7.81e-07!155;UBERON:0007026!7.81e-07!155;UBERON:0004119!8.33e-07!169;UBERON:0000925!8.33e-07!169;UBERON:0006595!8.33e-07!169;UBERON:0000996!8.67e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.04e-34;19!UBERON:0006925;7.04e-34;19!UBERON:0002423;5.75e-26;25!UBERON:0002365;8.79e-22;31!UBERON:0002330;8.79e-22;31!UBERON:0002368;1.59e-17;33!UBERON:0000949;1.12e-14;43!UBERON:0005172;8.79e-11;52!UBERON:0005173;8.79e-11;52!UBERON:0002021;3.49e-09;5!UBERON:0002530;4.20e-08;57!UBERON:0001007;6.28e-08;81!UBERON:0002417;1.94e-07;58!UBERON:0000916;1.94e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0002021,3.49e-09,5;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0005177,6.11e-07,101 | |||
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|short_description=p19@PLSCR4 | |short_description=p19@PLSCR4 | ||
}} | }} |
Latest revision as of 06:37, 25 September 2015
Short description: | p19@PLSCR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_PLSCR4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 48bp_to_ENST00000498625_5end |
EntrezGene: | PLSCR4 |
HGNC: | 16497 |
UniProt: | C9J3P9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-30 | 12 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
occipital lobe | 3.49e-09 | 5 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
trunk region element | 6.11e-07 | 101 |