FFCP PHASE1:Hg19::chr12:19459534..19459536,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:19459534..19459536,+
|short_description=p1@AK021937
|description=CAGE_peak_1_at_AK021937_5end
|association_with_transcript=-175bp_to_AK021937_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-175bp_to_AK021937_5end | |||
|cluster_id=chr12:19459534..19459536,+ | |||
|description=CAGE_peak_1_at_AK021937_5end | |||
|id=chr12:19459534..19459536,+ | |||
|ontology_enrichment_celltype=CL:0000453!9.74e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000342;8.02e-14;1!CL:0002565;8.02e-14;1!CL:0000764;1.49e-07;2!CL:0002588;1.49e-07;2!CL:0000558;1.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000342,1.83e-13,1;CL:0002565,1.83e-13,1;CL:0002588,1.05e-07,2;CL:0000764,1.99e-07,2;CL:0000765,1.99e-07,2;CL:0000050,1.99e-07,2;CL:0000038,1.99e-07,2;CL:0000558,1.99e-07,2;CL:0000547,1.99e-07,2;CL:0000549,1.99e-07,2;CL:0000550,1.99e-07,2;CL:0000552,1.99e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!9.83e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;8.02e-14;1!UBERON:0000026;8.02e-14;1!UBERON:0008784;8.02e-14;1!UBERON:0006058;8.02e-14;1!UBERON:0003663;8.02e-14;1!UBERON:0004256;8.02e-14;1!UBERON:0004708;8.02e-14;1!UBERON:0002101;8.02e-14;1!UBERON:0004709;8.02e-14;1!UBERON:0002529;8.02e-14;1!UBERON:0010538;8.02e-14;1!UBERON:0003661;8.02e-14;1!UBERON:0010890;8.02e-14;1!UBERON:0002471;8.02e-14;1!UBERON:0001383;8.02e-14;1!UBERON:0010758;8.02e-14;1!UBERON:0010707;8.02e-14;1!UBERON:0002506;8.02e-14;1!UBERON:0000978;8.02e-14;1!UBERON:0002103;8.02e-14;1!UBERON:0001665;8.02e-14;1!UBERON:0003823;8.02e-14;1!UBERON:0000154;8.02e-14;1!UBERON:0010709;8.02e-14;1!UBERON:0001769;8.02e-14;1!UBERON:0005090;1.49e-07;2!UBERON:0001630;1.49e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.08e-14,1;UBERON:0001389,3.08e-14,1;UBERON:0000026,3.08e-14,1;UBERON:0008784,3.08e-14,1;UBERON:0006058,3.08e-14,1;UBERON:0003663,3.08e-14,1;UBERON:0004256,3.08e-14,1;UBERON:0004708,3.08e-14,1;UBERON:0002101,3.08e-14,1;UBERON:0004709,3.08e-14,1;UBERON:0002529,3.08e-14,1;UBERON:0010538,3.08e-14,1;UBERON:0003661,3.08e-14,1;UBERON:0010890,3.08e-14,1;UBERON:0002471,3.08e-14,1;UBERON:0001383,3.08e-14,1;UBERON:0004357,3.08e-14,1;UBERON:0004347,3.08e-14,1;UBERON:0005420,3.08e-14,1;UBERON:0005732,3.08e-14,1;UBERON:0010758,3.08e-14,1;UBERON:0010707,3.08e-14,1;UBERON:0000978,3.08e-14,1;UBERON:0002103,3.08e-14,1;UBERON:0001665,3.08e-14,1;UBERON:0003823,3.08e-14,1;UBERON:0000154,3.08e-14,1;UBERON:0010709,3.08e-14,1;UBERON:0005733,3.08e-14,1;UBERON:0005730,3.08e-14,1;UBERON:0002506,1.83e-13,1;UBERON:0001769,1.83e-13,1;UBERON:0005090,9.25e-08,2;UBERON:0001630,9.25e-08,2 | |||
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| ||
|short_description=p1@AK021937 | |||
}} | }} |
Latest revision as of 07:23, 24 July 2015
Short description: | p1@AK021937 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK021937_5end |
Coexpression cluster: | NA |
Association with transcript: | -175bp_to_AK021937_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell (sensu Vertebrata) | 1.83e-13 | 1 |
iris pigment epithelial cell | 1.83e-13 | 1 |
smooth muscle cell of the umbilical vein | 1.05e-07 | 2 |
erythroid lineage cell | 1.99e-07 | 2 |
erythroblast | 1.99e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.99e-07 | 2 |
erythroid progenitor cell | 1.99e-07 | 2 |
reticulocyte | 1.99e-07 | 2 |
proerythroblast | 1.99e-07 | 2 |
basophilic erythroblast | 1.99e-07 | 2 |
polychromatophilic erythroblast | 1.99e-07 | 2 |
orthochromatic erythroblast | 1.99e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.08e-14 | 1 |
soleus muscle | 3.08e-14 | 1 |
appendage | 3.08e-14 | 1 |
lower limb segment | 3.08e-14 | 1 |
multi-limb segment region | 3.08e-14 | 1 |
hindlimb muscle | 3.08e-14 | 1 |
hindlimb zeugopod muscle | 3.08e-14 | 1 |
paired limb/fin | 3.08e-14 | 1 |
limb | 3.08e-14 | 1 |
pelvic appendage | 3.08e-14 | 1 |
limb segment | 3.08e-14 | 1 |
paired limb/fin segment | 3.08e-14 | 1 |
limb muscle | 3.08e-14 | 1 |
pelvic complex muscle | 3.08e-14 | 1 |
zeugopod | 3.08e-14 | 1 |
muscle of leg | 3.08e-14 | 1 |
paired limb/fin bud | 3.08e-14 | 1 |
limb bud | 3.08e-14 | 1 |
pelvic appendage bud | 3.08e-14 | 1 |
limb/fin field | 3.08e-14 | 1 |
subdivision of organism along appendicular axis | 3.08e-14 | 1 |
appendage girdle complex | 3.08e-14 | 1 |
leg | 3.08e-14 | 1 |
hindlimb | 3.08e-14 | 1 |
triceps surae | 3.08e-14 | 1 |
hindlimb zeugopod | 3.08e-14 | 1 |
posterior region of body | 3.08e-14 | 1 |
pelvic complex | 3.08e-14 | 1 |
limb field | 3.08e-14 | 1 |
hindlimb/pelvic fin field | 3.08e-14 | 1 |
iris epithelium | 1.83e-13 | 1 |
iris | 1.83e-13 | 1 |
muscle structure | 9.25e-08 | 2 |
muscle organ | 9.25e-08 | 2 |