FFCP PHASE1:Hg19::chr3:174988853..174988868,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=41015 | |HGNC=41015 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000424690_5end | |association_with_transcript=16bp_to_ENST00000424690_5end | ||
|cluster_id=chr3:174988853..174988868,- | |||
|coexpression_cluster_id=C2717 | |||
|description=CAGE_peak_1_at_NAALADL2-AS2_5end | |description=CAGE_peak_1_at_NAALADL2-AS2_5end | ||
|id=chr3:174988853..174988868,- | |id=chr3:174988853..174988868,- | ||
|ontology_enrichment_celltype=CL:0000945!4.17e-61!24;CL:0000826!4.17e-61!24;CL:0000542!4.81e-38!53;CL:0000051!4.81e-38!53;CL:0000838!6.63e-33!52;CL:0000785!3.59e-26!2;CL:0000955!3.59e-26!2;CL:0000818!3.59e-26!2;CL:0000954!3.59e-26!2;CL:0000816!3.59e-26!2;CL:0000817!8.40e-18!3;CL:0002087!5.81e-16!119;CL:0000946!3.50e-14!1;CL:0000786!3.50e-14!1;CL:0000980!3.50e-14!1;CL:0000819!8.58e-14!1;CL:0000738!2.41e-13!140;CL:0002031!7.51e-13!124;CL:0002032!4.39e-11!165;CL:0000837!4.39e-11!165;CL:0000037!1.44e-10!172;CL:0000566!1.44e-10!172;CL:0000988!6.76e-10!182 | |ontology_enrichment_celltype=CL:0000945!4.17e-61!24;CL:0000826!4.17e-61!24;CL:0000542!4.81e-38!53;CL:0000051!4.81e-38!53;CL:0000838!6.63e-33!52;CL:0000785!3.59e-26!2;CL:0000955!3.59e-26!2;CL:0000818!3.59e-26!2;CL:0000954!3.59e-26!2;CL:0000816!3.59e-26!2;CL:0000817!8.40e-18!3;CL:0002087!5.81e-16!119;CL:0000946!3.50e-14!1;CL:0000786!3.50e-14!1;CL:0000980!3.50e-14!1;CL:0000819!8.58e-14!1;CL:0000738!2.41e-13!140;CL:0002031!7.51e-13!124;CL:0002032!4.39e-11!165;CL:0000837!4.39e-11!165;CL:0000037!1.44e-10!172;CL:0000566!1.44e-10!172;CL:0000988!6.76e-10!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.34e-37;24!CL:0000946;5.92e-26;1!CL:0000786;5.92e-26;1!CL:0000542;6.86e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.08e-37,24;CL:0000826,4.08e-37,24;CL:0000946,2.78e-26,1;CL:0000786,2.78e-26,1;CL:0000980,2.78e-26,1;CL:0000542,6.50e-23,53;CL:0000051,6.50e-23,53;CL:0000838,2.82e-17,52;CL:0000785,7.30e-14,2;CL:0000955,7.30e-14,2;CL:0000818,7.30e-14,2;CL:0000954,7.30e-14,2;CL:0000816,7.30e-14,2;CL:0002087,1.68e-10,115;CL:0000817,1.10e-09,3;CL:0000738,6.97e-09,136;CL:0002032,1.70e-07,161;CL:0000837,1.70e-07,161;CL:0002031,1.82e-07,120;CL:0000037,3.51e-07,168;CL:0000988,8.25e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.07e-13;2!CL:0000051;6.86e-10;53 | |||
|ontology_enrichment_disease=DOID:0060058!8.99e-44!10;DOID:2531!1.04e-14!51;DOID:0060083!1.04e-14!51;DOID:12603!4.53e-14!1;DOID:0060073!8.58e-14!1;DOID:8675!8.58e-14!1;DOID:630!1.10e-13!1;DOID:0050177!1.10e-13!1;DOID:0050427!1.10e-13!1;DOID:2355!1.61e-13!1;DOID:74!2.12e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:12603;5.92e-26;1!DOID:0060058;6.94e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.61e-26,1;DOID:0060058,8.06e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.41e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.67e-09,3;UBERON:0004854,1.67e-09,3;UBERON:0009034,1.67e-09,3;UBERON:0002095,1.67e-09,3;UBERON:0004782,1.67e-09,3;UBERON:0003281,1.67e-09,3;UBERON:0009664,1.67e-09,3;UBERON:0002296,1.67e-09,3;UBERON:0005602,1.67e-09,3;UBERON:0001179,1.67e-09,3;UBERON:0006293,1.67e-09,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.55991119954897,1.18066171970519,0,0,0,0,0,0,0.154934401160603,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39917618294901,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29240217243854,1.55991119954897,1.18066171970519,0,0,0,0,0,0,0.154934401160603,1.42169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47701766553283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72850981333669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39917618294901,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p1@NAALADL2-AS2 | |short_description=p1@NAALADL2-AS2 | ||
}} | }} |
Latest revision as of 19:25, 16 September 2015
Short description: | p1@NAALADL2-AS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAALADL2-AS2_5end |
Coexpression cluster: | C2717_acute_B_xeroderma_b_splenic_plasma_Dendritic |
Association with transcript: | 16bp_to_ENST00000424690_5end |
EntrezGene: | NA |
HGNC: | 41015 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.08e-37 | 24 |
pro-B cell | 4.08e-37 | 24 |
antibody secreting cell | 2.78e-26 | 1 |
plasma cell | 2.78e-26 | 1 |
plasmablast | 2.78e-26 | 1 |
lymphocyte | 6.50e-23 | 53 |
common lymphoid progenitor | 6.50e-23 | 53 |
lymphoid lineage restricted progenitor cell | 2.82e-17 | 52 |
mature B cell | 7.30e-14 | 2 |
pre-B-II cell | 7.30e-14 | 2 |
transitional stage B cell | 7.30e-14 | 2 |
small pre-B-II cell | 7.30e-14 | 2 |
immature B cell | 7.30e-14 | 2 |
nongranular leukocyte | 1.68e-10 | 115 |
precursor B cell | 1.10e-09 | 3 |
leukocyte | 6.97e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.70e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 1.82e-07 | 120 |
hematopoietic stem cell | 3.51e-07 | 168 |
hematopoietic cell | 8.25e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.67e-09 | 3 |
gastrointestinal system mesentery | 1.67e-09 | 3 |
stomach region | 1.67e-09 | 3 |
mesentery | 1.67e-09 | 3 |
gastrointestinal system serosa | 1.67e-09 | 3 |
mesentery of stomach | 1.67e-09 | 3 |
gut mesentery | 1.67e-09 | 3 |
dorsal mesentery | 1.67e-09 | 3 |
dorsal mesogastrium | 1.67e-09 | 3 |
peritoneal cavity | 1.67e-09 | 3 |
spleen primordium | 1.67e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.61e-26 | 1 |
lymphoma | 8.06e-11 | 10 |