FFCP PHASE1:Hg19::chr12:30948600..30948609,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:30948600..30948609,+
|short_description=p5@LOC100287314
|description=CAGE_peak_5_at_LOC100287314_5end
|association_with_transcript=-5bp_to_ENST00000550292...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100287314 | |EntrezGene=100287314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-5bp_to_ENST00000550292,NR_040245_5end | |||
|cluster_id=chr12:30948600..30948609,+ | |||
|description=CAGE_peak_5_at_LOC100287314_5end | |||
|id=chr12:30948600..30948609,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002582;9.43e-11;3!CL:0002592;9.43e-11;3!CL:0002595;5.86e-07;5!CL:0002188;5.86e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,8.17e-11,3;CL:0002582,1.20e-10,3;CL:0002595,5.70e-07,5;CL:0002188,6.04e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4556;9.43e-11;3!DOID:3908;5.86e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,7.42e-11,3;DOID:3908,5.08e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003498;9.43e-11;3!UBERON:0005985;9.43e-11;3!UBERON:0001621;9.43e-11;3!UBERON:0003834;5.86e-07;5!UBERON:0001533;5.86e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001621,8.17e-11,3;UBERON:0003498,5.38e-07,5;UBERON:0005985,5.38e-07,5;UBERON:0003834,5.70e-07,5;UBERON:0001533,5.70e-07,5 | |||
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| ||
|short_description=p5@LOC100287314 | |||
}} | }} |
Latest revision as of 02:52, 18 September 2015
Short description: | p5@LOC100287314 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LOC100287314_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_ENST00000550292, NR_040245_5end |
EntrezGene: | LOC100287314 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 8.17e-11 | 3 |
visceral preadipocyte | 1.20e-10 | 3 |
smooth muscle cell of the subclavian artery | 5.70e-07 | 5 |
glomerular endothelial cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
coronary artery | 8.17e-11 | 3 |
heart blood vessel | 5.38e-07 | 5 |
coronary vessel | 5.38e-07 | 5 |
thoracic segment blood vessel | 5.70e-07 | 5 |
subclavian artery | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 7.42e-11 | 3 |
non-small cell lung carcinoma | 5.08e-07 | 5 |