FFCP PHASE1:Hg19::chr12:49488535..49488546,-: Difference between revisions
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|id=chr12:49488535..49488546,-
|short_description=p3@DHH
|description=CAGE_peak_3_at_DHH_5end
|association_with_transcript=55bp_to_ENST00000266991,NM_021044,uc001rt...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=50846 | |EntrezGene=50846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2865 | |HGNC=2865 | ||
|TSSclassifier=strong | |||
|UniProt=O43323 | |UniProt=O43323 | ||
|association_with_transcript=55bp_to_ENST00000266991,NM_021044,uc001rtf.2_5end | |||
|cluster_id=chr12:49488535..49488546,- | |||
|coexpression_cluster_id=C2209 | |||
|description=CAGE_peak_3_at_DHH_5end | |||
|id=chr12:49488535..49488546,- | |||
|ontology_enrichment_celltype=CL:0002139!1.80e-17!24;CL:0000071!8.48e-17!18;CL:0002546!8.48e-17!18;CL:1000413!3.96e-13!9;CL:0000115!4.06e-11!35;CL:0002078!2.62e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002544;8.97e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002544,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.36e-14;10!UBERON:0005564;3.36e-14;10!UBERON:0006241;2.19e-12;3!UBERON:0003057;2.19e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;7.05e-34;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,7.06e-34,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.25e-20!115;UBERON:0001986!8.48e-17!18;UBERON:0004638!8.48e-17!18;UBERON:0004852!8.48e-17!18;UBERON:0000487!2.34e-13!22;UBERON:0003915!3.96e-13!9;UBERON:0004700!3.96e-13!9;UBERON:0001917!3.96e-13!9;UBERON:0006914!1.68e-11!25;UBERON:0002298!7.08e-10!8;UBERON:0002950!1.51e-07!2;UBERON:0001891!1.51e-07!2;UBERON:0009616!1.51e-07!2;UBERON:0003127!2.23e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.78e-17;8!UBERON:0003135;5.26e-13;11!UBERON:0002240;2.19e-12;3!UBERON:0005174;2.19e-12;3!UBERON:0001137;2.19e-12;3!UBERON:0000991;2.82e-07;21!UBERON:0003101;5.49e-07;22!UBERON:0000079;5.49e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.57e-17,8;UBERON:0003135,4.80e-13,11;UBERON:0002240,2.31e-12,3;UBERON:0005174,2.31e-12,3;UBERON:0001137,2.31e-12,3;UBERON:0000991,2.69e-07,21;UBERON:0009196,2.69e-07,21;UBERON:0009117,2.69e-07,21;UBERON:0005564,2.69e-07,21;UBERON:0004176,5.24e-07,22;UBERON:0003101,5.24e-07,22;UBERON:0000079,5.24e-07,22 | |||
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|short_description=p3@DHH | |||
}} | }} |
Latest revision as of 15:33, 18 September 2015
Short description: | p3@DHH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHH_5end |
Coexpression cluster: | C2209_acute_testis_spinal_Endothelial_rectum_heart_substantia |
Association with transcript: | 55bp_to_ENST00000266991, NM_021044, uc001rtf.2_5end |
EntrezGene: | DHH |
HGNC: | 2865 |
UniProt: | O43323 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic endothelial cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 1.57e-17 | 8 |
male reproductive organ | 4.80e-13 | 11 |
spinal cord | 2.31e-12 | 3 |
dorsal region element | 2.31e-12 | 3 |
dorsum | 2.31e-12 | 3 |
gonad | 2.69e-07 | 21 |
indifferent external genitalia | 2.69e-07 | 21 |
indifferent gonad | 2.69e-07 | 21 |
gonad primordium | 2.69e-07 | 21 |
external genitalia | 5.24e-07 | 22 |
male organism | 5.24e-07 | 22 |
male reproductive system | 5.24e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 7.06e-34 | 1 |