FFCP PHASE1:Hg19::chr4:42399364..42399373,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=152573 | |EntrezGene=152573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25159 | |HGNC=25159 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJX4 | |UniProt=A0PJX4 | ||
|association_with_transcript=-482bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | |association_with_transcript=-482bp_to_ENST00000319234,NM_001080505,uc003gwp.2_5end | ||
|cluster_id=chr4:42399364..42399373,+ | |||
|description=CAGE_peak_7_at_SHISA3_5end | |description=CAGE_peak_7_at_SHISA3_5end | ||
|id=chr4:42399364..42399373,+ | |id=chr4:42399364..42399373,+ | ||
|ontology_enrichment_celltype=CL:0002504!5.12e-13!3;CL:1000279!5.12e-13!3;CL:1000280!5.12e-13!3;CL:0002322!9.05e-08!5 | |ontology_enrichment_celltype=CL:0002504!5.12e-13!3;CL:1000279!5.12e-13!3;CL:1000280!5.12e-13!3;CL:0002322!9.05e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000333;4.66e-21;5!CL:0002321;5.74e-08;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.27e-10;11!UBERON:0009497;5.49e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;8.34e-18;6!DOID:171;2.87e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:169,9.07e-18,6;DOID:171,3.02e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.97e-09!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;4.66e-21;5!UBERON:0002410;4.66e-21;5!UBERON:0000010;2.31e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,5.15e-21,5;UBERON:0002410,5.15e-21,5;UBERON:0000010,2.45e-12,8 | |||
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| ||
|short_description=p7@SHISA3 | |short_description=p7@SHISA3 | ||
}} | }} |
Latest revision as of 20:13, 17 September 2015
Short description: | p7@SHISA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SHISA3_5end |
Coexpression cluster: | NA |
Association with transcript: | -482bp_to_ENST00000319234, NM_001080505, uc003gwp.2_5end |
EntrezGene: | SHISA3 |
HGNC: | 25159 |
UniProt: | A0PJX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 5.15e-21 | 5 |
autonomic nervous system | 5.15e-21 | 5 |
peripheral nervous system | 2.45e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 9.07e-18 | 6 |
neuroectodermal tumor | 3.02e-11 | 10 |