FFCP PHASE1:Hg19::chr1:196539193..196539198,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:196539193..196539198,- | |||
|coexpression_cluster_id=C425 | |||
|description=CAGE_peak_at_chr1:196539193..196539198,- | |description=CAGE_peak_at_chr1:196539193..196539198,- | ||
|id=chr1:196539193..196539198,- | |id=chr1:196539193..196539198,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;5.15e-21;2!CL:0002319;4.96e-14;25!CL:0000540;5.54e-08;6!CL:0000404;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,8.12e-21,8;CL:0002319,5.42e-14,25;CL:0000540,5.54e-08,6;CL:0000031,5.54e-08,6;CL:0000404,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006238;2.17e-15;10!UBERON:0003056;1.71e-14;3!CL:0000031;5.54e-08;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3307;5.15e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.66e-21,2 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.47e-08!82;UBERON:0000073!1.49e-08!94;UBERON:0001016!1.49e-08!94;UBERON:0005743!5.91e-08!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;3.10e-09;5!UBERON:0005388;3.10e-09;5!UBERON:0001802;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-08,81;UBERON:0000966,7.25e-08,6;UBERON:0005388,7.25e-08,6;UBERON:0001802,7.25e-08,6;UBERON:0001016,1.50e-07,89 | |||
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| ||
|short_description=p@chr1:196539193..196539198,- | |short_description=p@chr1:196539193..196539198,- | ||
}} | }} |
Latest revision as of 01:48, 28 July 2015
Short description: | p@chr1:196539193..196539198, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:196539193..196539198, - |
Coexpression cluster: | C425_iPS_HES3GFP_H9_teratocarcinoma_testicular_hepatocellular_Wilms |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 8.12e-21 | 8 |
neural cell | 5.42e-14 | 25 |
neuron | 5.54e-08 | 6 |
neuroblast | 5.54e-08 | 6 |
electrically signaling cell | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.64e-08 | 81 |
retina | 7.25e-08 | 6 |
photoreceptor array | 7.25e-08 | 6 |
posterior segment of eyeball | 7.25e-08 | 6 |
nervous system | 1.50e-07 | 89 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.66e-21 | 2 |