FFCP PHASE1:Hg19::chr1:205325994..205326016,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000491471_5end | |association_with_transcript=0bp_to_ENST00000491471_5end | ||
|cluster_id=chr1:205325994..205326016,- | |||
|description=CAGE_peak_4_at_KLHDC8A_5end | |description=CAGE_peak_4_at_KLHDC8A_5end | ||
|id=chr1:205325994..205326016,- | |id=chr1:205325994..205326016,- | ||
|ontology_enrichment_celltype=CL:0002319!1.44e-08!25;CL:0002605!6.89e-08!3;CL:0000047!7.39e-08!8 | |ontology_enrichment_celltype=CL:0002319!1.44e-08!25;CL:0002605!6.89e-08!3;CL:0000047!7.39e-08!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;3.46e-21;2!CL:0002319;8.18e-13;25!CL:0000540;1.80e-07;6!CL:0000404;1.80e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,4.20e-20,8;CL:0002319,8.18e-13,25;CL:0000133,1.71e-09,59;CL:0000221,1.17e-07,72;CL:0000540,1.74e-07,6;CL:0000031,1.74e-07,6;CL:0000404,1.74e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000031;1.80e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0005795;3.63e-11;1!UBERON:0000922;6.54e-08;49!UBERON:0002791;6.44e-07;32!UBERON:0001869;7.48e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.36e-14,89;UBERON:0001017,6.90e-13,81;UBERON:0004121,1.17e-07,171;UBERON:0000924,1.17e-07,171;UBERON:0006601,1.17e-07,171;UBERON:0002791,1.67e-07,32;UBERON:0001869,1.67e-07,32;UBERON:0003528,4.58e-07,34;UBERON:0002020,4.58e-07,34;UBERON:0001893,4.58e-07,34 | |||
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| ||
|short_description=p4@KLHDC8A | |short_description=p4@KLHDC8A | ||
}} | }} |
Latest revision as of 02:48, 20 September 2015
Short description: | p4@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KLHDC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000491471_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 4.20e-20 | 8 |
neural cell | 8.18e-13 | 25 |
neurectodermal cell | 1.71e-09 | 59 |
ectodermal cell | 1.17e-07 | 72 |
neuron | 1.74e-07 | 6 |
neuroblast | 1.74e-07 | 6 |
electrically signaling cell | 1.74e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.36e-14 | 89 |
central nervous system | 6.90e-13 | 81 |
ectoderm-derived structure | 1.17e-07 | 171 |
ectoderm | 1.17e-07 | 171 |
presumptive ectoderm | 1.17e-07 | 171 |
regional part of telencephalon | 1.67e-07 | 32 |
cerebral hemisphere | 1.67e-07 | 32 |
brain grey matter | 4.58e-07 | 34 |
gray matter | 4.58e-07 | 34 |
telencephalon | 4.58e-07 | 34 |