FFCP PHASE1:Hg19::chr5:101014413..101014437,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:101014413..101014437,- | |||
|coexpression_cluster_id=C2677 | |||
|description=CAGE_peak_at_chr5:101014413..101014437,- | |description=CAGE_peak_at_chr5:101014413..101014437,- | ||
|id=chr5:101014413..101014437,- | |id=chr5:101014413..101014437,- | ||
|ontology_enrichment_celltype=CL:0002563!1.07e-09!4;CL:0002253!4.71e-09!2 | |ontology_enrichment_celltype=CL:0002563!1.07e-09!4;CL:0002253!4.71e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000167;1.07e-23;1!CL:0000164;1.07e-23;1!CL:0000502;1.07e-23;1!CL:0000172;1.07e-23;1!CL:0000173;1.07e-23;1!CL:0002553;1.34e-23;1!CL:0002563;8.96e-23;4!CL:0002253;2.90e-12;2!CL:0000306;9.10e-07;4!CL:0002222;9.10e-07;4!CL:0002224;9.10e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.07e-23,1;CL:0000164,1.07e-23,1;CL:0000502,1.07e-23,1;CL:0000172,1.07e-23,1;CL:0000173,1.07e-23,1;CL:0002351,1.07e-23,1;CL:0002553,1.34e-23,1;CL:0002563,6.42e-23,4;CL:0002253,2.32e-12,2;CL:0000306,9.63e-07,4;CL:0002222,9.63e-07,4;CL:0002224,9.63e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002351;1.07e-23;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.07e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.07e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0004907!5.11e-13!5;UBERON:0001242!1.07e-09!4;UBERON:0001262!1.07e-09!4;UBERON:0004786!1.07e-09!4;UBERON:0004808!1.07e-09!4;UBERON:0001277!1.07e-09!4;UBERON:0001052!1.23e-09!4;UBERON:0000059!1.47e-08!11;UBERON:0003350!7.89e-08!5;UBERON:0001155!6.09e-07!9;UBERON:0007023!6.56e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;8.96e-23;4!UBERON:0001262;8.96e-23;4!UBERON:0004786;8.96e-23;4!UBERON:0004808;8.96e-23;4!UBERON:0001277;8.96e-23;4!UBERON:0000485;1.80e-13;7!UBERON:0003929;1.80e-13;7!UBERON:0003350;6.51e-12;8!UBERON:0000988;1.00e-08;3!UBERON:0001052;9.10e-07;4!UBERON:0010077;9.10e-07;4!UBERON:0005389;9.10e-07;4!UBERON:0000484;9.10e-07;4!UBERON:0000965;9.10e-07;4!UBERON:0001803;9.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.42e-23,4;UBERON:0001262,6.42e-23,4;UBERON:0004786,6.42e-23,4;UBERON:0004808,6.42e-23,4;UBERON:0001277,6.42e-23,4;UBERON:0003350,5.52e-12,8;UBERON:0000485,9.23e-11,9;UBERON:0000988,1.04e-08,3;UBERON:0001052,8.14e-07,4;UBERON:0010077,9.63e-07,4;UBERON:0005389,9.63e-07,4;UBERON:0000484,9.63e-07,4;UBERON:0002546,9.63e-07,4;UBERON:0000965,9.63e-07,4;UBERON:0001803,9.63e-07,4;UBERON:0003073,9.63e-07,4;UBERON:0005426,9.63e-07,4 | |||
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| ||
|short_description=p@chr5:101014413..101014437,- | |short_description=p@chr5:101014413..101014437,- | ||
}} | }} |
Latest revision as of 08:20, 30 July 2015
Short description: | p@chr5:101014413..101014437, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:101014413..101014437, - |
Coexpression cluster: | C2677_somatostatinoma_nonsmall_rhabdomyosarcoma_pons_small_neuroblastoma_kidney |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.07e-23 | 1 |
enteroendocrine cell | 1.07e-23 | 1 |
type D enteroendocrine cell | 1.07e-23 | 1 |
somatostatin secreting cell | 1.07e-23 | 1 |
pancreatic D cell | 1.07e-23 | 1 |
progenitor cell of endocrine pancreas | 1.07e-23 | 1 |
lung fibroblast | 1.34e-23 | 1 |
intestinal epithelial cell | 6.42e-23 | 4 |
epithelial cell of large intestine | 2.32e-12 | 2 |
crystallin accumulating cell | 9.63e-07 | 4 |
vertebrate lens cell | 9.63e-07 | 4 |
lens epithelial cell | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.42e-23 | 4 |
wall of intestine | 6.42e-23 | 4 |
gastrointestinal system mucosa | 6.42e-23 | 4 |
gastrointestinal system epithelium | 6.42e-23 | 4 |
intestinal epithelium | 6.42e-23 | 4 |
epithelium of mucosa | 5.52e-12 | 8 |
simple columnar epithelium | 9.23e-11 | 9 |
pons | 1.04e-08 | 3 |
rectum | 8.14e-07 | 4 |
cuboidal epithelium | 9.63e-07 | 4 |
transparent eye structure | 9.63e-07 | 4 |
simple cuboidal epithelium | 9.63e-07 | 4 |
cranial placode | 9.63e-07 | 4 |
lens of camera-type eye | 9.63e-07 | 4 |
epithelium of lens | 9.63e-07 | 4 |
lens placode | 9.63e-07 | 4 |
lens vesicle | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.07e-23 | 1 |