FFCP PHASE1:Hg19::chr1:41249539..41249550,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9132 | |EntrezGene=9132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6298 | |HGNC=6298 | ||
|TSSclassifier=strong | |||
|UniProt=P56696,B3KQH8 | |UniProt=P56696,B3KQH8 | ||
|association_with_transcript=-133bp_to_ENST00000347132,NM_004700,NM_172163,uc001cgh.1,uc001cgi.1_5end | |association_with_transcript=-133bp_to_ENST00000347132,NM_004700,NM_172163,uc001cgh.1,uc001cgi.1_5end | ||
|cluster_id=chr1:41249539..41249550,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_4_at_KCNQ4_5end | |description=CAGE_peak_4_at_KCNQ4_5end | ||
|id=chr1:41249539..41249550,+ | |id=chr1:41249539..41249550,+ | ||
|ontology_enrichment_celltype=CL:0000188!1.47e-08!9;CL:0000039!7.90e-08!7;CL:0000586!7.90e-08!7 | |ontology_enrichment_celltype=CL:0000188!1.47e-08!9;CL:0000039!7.90e-08!7;CL:0000586!7.90e-08!7 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.67e-23;1!UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.57e-17!115;UBERON:0000955!2.95e-09!69;UBERON:0006238!2.95e-09!69;UBERON:0005743!3.92e-09!86;UBERON:0000073!1.51e-08!94;UBERON:0001016!1.51e-08!94;UBERON:0002616!3.62e-08!59;UBERON:0001017!7.49e-08!82;UBERON:0001049!1.74e-07!57;UBERON:0005068!1.74e-07!57;UBERON:0006241!1.74e-07!57;UBERON:0007135!1.74e-07!57;UBERON:0000153!2.08e-07!129;UBERON:0007811!2.08e-07!129;UBERON:0002298!6.43e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000989;3.67e-23;1!UBERON:0008811;3.67e-23;1!UBERON:0000020;2.38e-09;23!UBERON:0001032;5.50e-09;24!UBERON:0004456;5.50e-09;24!UBERON:0001723;1.26e-08;3!UBERON:0001033;1.26e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000989,3.28e-23,1;UBERON:0008811,3.28e-23,1;UBERON:0006258,3.28e-23,1;UBERON:0005876,3.28e-23,1;UBERON:0004874,3.28e-23,1;UBERON:0000020,5.28e-09,24;UBERON:0001032,5.28e-09,24;UBERON:0004456,5.28e-09,24;UBERON:0001723,1.12e-08,3;UBERON:0001033,1.12e-08,3;UBERON:0010056,1.12e-08,3 | |||
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| ||
|short_description=p4@KCNQ4 | |short_description=p4@KCNQ4 | ||
}} | }} |
Latest revision as of 02:01, 18 September 2015
Short description: | p4@KCNQ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_KCNQ4_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -133bp_to_ENST00000347132, NM_004700, NM_172163, uc001cgh.1, uc001cgi.1_5end |
EntrezGene: | KCNQ4 |
HGNC: | 6298 |
UniProt: | P56696B3KQH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
penis | 3.28e-23 | 1 |
intromittent organ | 3.28e-23 | 1 |
lateral plate mesenchyme | 3.28e-23 | 1 |
undifferentiated genital tubercle | 3.28e-23 | 1 |
somatopleure | 3.28e-23 | 1 |
sense organ | 5.28e-09 | 24 |
sensory system | 5.28e-09 | 24 |
entire sense organ system | 5.28e-09 | 24 |
tongue | 1.12e-08 | 3 |
gustatory system | 1.12e-08 | 3 |
future tongue | 1.12e-08 | 3 |