FFCP PHASE1:Hg19::chr6:135271219..135271257,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64577 | |EntrezGene=64577 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15471 | |HGNC=15471 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H2A2 | |UniProt=Q9H2A2 | ||
|association_with_transcript=0bp_to_ENST00000349305,ENST00000367845,ENST00000367847,uc003qew.2,uc003qex.2,uc010kgh.2,uc011ecx.1_5end | |association_with_transcript=0bp_to_ENST00000349305,ENST00000367845,ENST00000367847,uc003qew.2,uc003qex.2,uc010kgh.2,uc011ecx.1_5end | ||
|cluster_id=chr6:135271219..135271257,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_1_at_ALDH8A1_5end | |description=CAGE_peak_1_at_ALDH8A1_5end | ||
|id=chr6:135271219..135271257,- | |id=chr6:135271219..135271257,- | ||
|ontology_enrichment_celltype=CL:0000181!7.25e-13!12;CL:0000417!7.25e-13!12;CL:0000668!7.25e-13!12;CL:0000414!7.25e-13!12;CL:0000412!7.25e-13!12;CL:0000182!7.25e-13!12 | |ontology_enrichment_celltype=CL:0000181!7.25e-13!12;CL:0000417!7.25e-13!12;CL:0000668!7.25e-13!12;CL:0000414!7.25e-13!12;CL:0000412!7.25e-13!12;CL:0000182!7.25e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;6.17e-37;12!CL:0000313;1.10e-13;1!CL:0000159;1.75e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.98e-37,12;CL:0000313,1.10e-13,1;CL:0000159,1.75e-07,2;CL:0000223,2.06e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.71e-28;11!UBERON:0009497;1.10e-23;13!UBERON:0003104;4.12e-19;31!UBERON:0001041;2.90e-10;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;1.10e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.10e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0005172!2.67e-16!55;UBERON:0005173!2.67e-16!55;UBERON:0005057!6.49e-15!26;UBERON:0002417!2.53e-14!61;UBERON:0000916!2.53e-14!61;UBERON:0002107!8.01e-14!19;UBERON:0006925!8.01e-14!19;UBERON:0008836!8.01e-14!19;UBERON:0009497!1.07e-12!25;UBERON:0000015!1.07e-12!25;UBERON:0002423!1.07e-12!25;UBERON:0006235!1.07e-12!25;UBERON:0004161!1.07e-12!25;UBERON:0002368!1.49e-12!35;UBERON:0008835!9.56e-12!22;UBERON:0003894!9.56e-12!22;UBERON:0009854!3.57e-11!23;UBERON:0003929!2.15e-10!54;UBERON:0007499!3.61e-10!25;UBERON:0009856!1.01e-09!26;UBERON:0000949!2.91e-09!45;UBERON:0002365!6.20e-08!31;UBERON:0002330!6.20e-08!31;UBERON:0005177!1.34e-07!107;UBERON:0009569!5.31e-07!113;UBERON:0005911!5.79e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.86e-41;19!UBERON:0006925;3.86e-41;19!UBERON:0002423;4.06e-31;25!UBERON:0002365;4.83e-24;31!UBERON:0002330;4.83e-24;31!UBERON:0002368;3.36e-21;33!UBERON:0000949;1.56e-15;43!UBERON:0005172;1.08e-14;52!UBERON:0005173;1.08e-14;52!UBERON:0004911;1.10e-13;1!UBERON:0002417;1.93e-11;58!UBERON:0000916;1.93e-11;58!UBERON:0002530;3.97e-08;57!UBERON:0004909;1.75e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.76e-41,19;UBERON:0006925,3.76e-41,19;UBERON:0008836,3.76e-41,19;UBERON:0008835,1.86e-35,22;UBERON:0003894,1.86e-35,22;UBERON:0009854,6.88e-34,23;UBERON:0007499,3.98e-31,25;UBERON:0009497,3.98e-31,25;UBERON:0000015,3.98e-31,25;UBERON:0002423,3.98e-31,25;UBERON:0006235,3.98e-31,25;UBERON:0004161,3.98e-31,25;UBERON:0009856,6.64e-30,26;UBERON:0002365,5.67e-25,31;UBERON:0002330,5.67e-25,31;UBERON:0002368,4.87e-22,35;UBERON:0005172,6.65e-22,54;UBERON:0005173,6.65e-22,54;UBERON:0002417,1.33e-19,60;UBERON:0000916,1.33e-19,60;UBERON:0000949,5.60e-17,45;UBERON:0003929,5.08e-14,54;UBERON:0004911,1.10e-13,1;UBERON:0002530,9.16e-13,59;UBERON:0005177,3.65e-11,101;UBERON:0009569,6.04e-10,112;UBERON:0005911,5.95e-09,82;UBERON:0001041,2.18e-08,87;UBERON:0004909,1.75e-07,2 | |||
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| ||
|short_description=p1@ALDH8A1 | |short_description=p1@ALDH8A1 | ||
}} | }} |
Latest revision as of 22:44, 24 September 2015
Short description: | p1@ALDH8A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH8A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000349305, ENST00000367845, ENST00000367847, uc003qew.2, uc003qex.2, uc010kgh.2, uc011ecx.1_5end |
EntrezGene: | ALDH8A1 |
HGNC: | 15471 |
UniProt: | Q9H2A2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.98e-37 | 12 |
serous secreting cell | 1.10e-13 | 1 |
seromucus secreting cell | 1.75e-07 | 2 |
endodermal cell | 2.06e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.76e-41 | 19 |
digestive gland | 3.76e-41 | 19 |
liver bud | 3.76e-41 | 19 |
hepatic diverticulum | 1.86e-35 | 22 |
liver primordium | 1.86e-35 | 22 |
digestive tract diverticulum | 6.88e-34 | 23 |
epithelial sac | 3.98e-31 | 25 |
epithelium of foregut-midgut junction | 3.98e-31 | 25 |
anatomical boundary | 3.98e-31 | 25 |
hepatobiliary system | 3.98e-31 | 25 |
foregut-midgut junction | 3.98e-31 | 25 |
septum transversum | 3.98e-31 | 25 |
sac | 6.64e-30 | 26 |
exocrine gland | 5.67e-25 | 31 |
exocrine system | 5.67e-25 | 31 |
endocrine gland | 4.87e-22 | 35 |
abdomen element | 6.65e-22 | 54 |
abdominal segment element | 6.65e-22 | 54 |
abdominal segment of trunk | 1.33e-19 | 60 |
abdomen | 1.33e-19 | 60 |
endocrine system | 5.60e-17 | 45 |
gut epithelium | 5.08e-14 | 54 |
epithelium of female gonad | 1.10e-13 | 1 |
gland | 9.16e-13 | 59 |
trunk region element | 3.65e-11 | 101 |
subdivision of trunk | 6.04e-10 | 112 |
endo-epithelium | 5.95e-09 | 82 |
foregut | 2.18e-08 | 87 |
epithelium of gonad | 1.75e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.10e-13 | 1 |