FFCP PHASE1:Hg19::chr13:114780855..114780894,-: Difference between revisions
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|id=chr13:114780855..114780894,-
|short_description=p@chr13:114780855..114780894,-
|description=CAGE_peak_at_chr13:114780855..114780894,-
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:114780855..114780894,- | |||
|description=CAGE_peak_at_chr13:114780855..114780894,- | |||
|id=chr13:114780855..114780894,- | |||
|ontology_enrichment_celltype=CL:0002150!3.49e-10!3;CL:0000861!3.49e-10!3;CL:0000136!7.00e-09!15;CL:1000415!9.02e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;7.84e-09;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.96e-08,253;CL:0000136,1.14e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.04e-26;29 | |||
|ontology_enrichment_disease=DOID:305!6.25e-17!106;DOID:0050687!2.05e-12!143;DOID:1749!8.55e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.03e-07;1!DOID:3603;1.03e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,4.75e-26,106;DOID:0050687,3.26e-18,143;DOID:162,1.61e-10,235;DOID:14566,3.30e-10,239;DOID:3111,1.06e-07,1;DOID:3603,1.06e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.46e-26!9;UBERON:0001557!4.24e-14!19;UBERON:0008947!5.66e-12!38;UBERON:0003258!5.66e-12!38;UBERON:0000072!2.59e-09!46;UBERON:0000077!7.00e-09!130;UBERON:0000065!7.39e-09!53;UBERON:0001007!1.76e-08!155;UBERON:0001555!1.76e-08!155;UBERON:0007026!1.76e-08!155;UBERON:0001004!1.86e-08!72;UBERON:0004119!6.53e-08!169;UBERON:0000925!6.53e-08!169;UBERON:0006595!6.53e-08!169;UBERON:0000002!9.86e-08!6;UBERON:0001560!9.86e-08!6;UBERON:0004921!3.48e-07!129;UBERON:0004185!3.48e-07!129;UBERON:0002294!6.83e-07!7;UBERON:0001173!6.83e-07!7;UBERON:0004912!6.83e-07!7;UBERON:0000063!7.30e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-59;9!UBERON:0001557;8.83e-59;9!UBERON:0000072;3.94e-17;37!UBERON:0000065;2.88e-14;44!UBERON:0002294;7.39e-09;7!UBERON:0001173;7.39e-09;7!UBERON:0000997;7.85e-08;1!UBERON:0005056;7.85e-08;1!UBERON:0004176;7.85e-08;1!UBERON:0004913;1.03e-07;1!UBERON:0003703;1.03e-07;1!UBERON:0001174;1.03e-07;1!UBERON:0004914;1.03e-07;1!UBERON:0002394;2.07e-07;4!UBERON:0003928;2.07e-07;4!UBERON:0001004;6.86e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.22e-59,9;UBERON:0001557,3.46e-27,19;UBERON:0008947,3.08e-19,38;UBERON:0003258,3.08e-19,38;UBERON:0000072,3.52e-15,47;UBERON:0000065,5.87e-13,54;UBERON:0001041,2.15e-10,87;UBERON:0001004,6.24e-09,74;UBERON:0000997,8.12e-08,1;UBERON:0005056,8.12e-08,1;UBERON:0004913,1.14e-07,1;UBERON:0003703,1.14e-07,1;UBERON:0001174,1.14e-07,1;UBERON:0004914,1.14e-07,1;UBERON:0001048,2.26e-07,160;UBERON:0001007,3.15e-07,145;UBERON:0001555,3.15e-07,145;UBERON:0007026,3.15e-07,145;UBERON:0002294,5.48e-07,9;UBERON:0001173,5.48e-07,9;UBERON:0004912,5.48e-07,9;UBERON:0004921,5.90e-07,118 | |||
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|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.7434876022711,5.73187946265546,2.89213235860178,6.17646247301406,4.35758888184812,3.08451804844426,6.87639671616838,4.12065076763227,6.92544882503503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0,0,0,0,3.40140231883657,0,0.394573622547734,0,0,0,0,0,0,0,13.0499923578263,7.05519379370098,1.5255219017566,3.30942754475111,0.344743373241465,0,0,0,0,0,0,0,0,9.69552325319012,0.975966209950223,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,2.6457947301882,0,0,0,6.09564887121236,6.5780385377567,7.39039113478883,0,0,0.451961481561065,0,0,0,0.586654148204409,1.28254112402454,0,0.39961921916426,0,0,0,0,0,4.00679858848552,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5476039091159,0.0607495566580247,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0,0,0,7.07223144380316,16.2948431114755,7.96498499585,7.2131978756157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26787274015176,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353909170043221,0,0.231051332300676,0,0,0,0,0,0,0,0,1.18284868973636,0.0675375846183947,0,0,0,0,0,0.992422356778588,0,0,0,0,0.606965604236632,0,0.266107110487916,0,0,0,0.0657727735628491,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0.357382720883282,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,3.92818664932447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,1.01835453245064,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:114780855..114780894,- | |||
}} | }} |
Latest revision as of 14:51, 24 July 2015
Short description: | p@chr13:114780855..114780894, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114780855..114780894, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.96e-08 | 253 |
fat cell | 1.14e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.22e-59 | 9 |
upper respiratory tract | 3.46e-27 | 19 |
respiratory primordium | 3.08e-19 | 38 |
endoderm of foregut | 3.08e-19 | 38 |
segment of respiratory tract | 3.52e-15 | 47 |
respiratory tract | 5.87e-13 | 54 |
foregut | 2.15e-10 | 87 |
respiratory system | 6.24e-09 | 74 |
mammalian vulva | 8.12e-08 | 1 |
external female genitalia | 8.12e-08 | 1 |
hepatopancreatic ampulla | 1.14e-07 | 1 |
extrahepatic bile duct | 1.14e-07 | 1 |
common bile duct | 1.14e-07 | 1 |
duodenal papilla | 1.14e-07 | 1 |
primordium | 2.26e-07 | 160 |
digestive system | 3.15e-07 | 145 |
digestive tract | 3.15e-07 | 145 |
primitive gut | 3.15e-07 | 145 |
biliary system | 5.48e-07 | 9 |
biliary tree | 5.48e-07 | 9 |
biliary bud | 5.48e-07 | 9 |
subdivision of digestive tract | 5.90e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 4.75e-26 | 106 |
cell type cancer | 3.26e-18 | 143 |
cancer | 1.61e-10 | 235 |
disease of cellular proliferation | 3.30e-10 | 239 |
cystadenocarcinoma | 1.06e-07 | 1 |
mucinous cystadenocarcinoma | 1.06e-07 | 1 |