FFCP PHASE1:Hg19::chr13:19756206..19756226,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:19756206..19756226,+
|short_description=p@chr13:19756206..19756226,+
|description=CAGE_peak_at_chr13:19756206..19756226,+
|association_with_transcript=NA
...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:19756206..19756226,+ | |||
|coexpression_cluster_id=C1701 | |||
|description=CAGE_peak_at_chr13:19756206..19756226,+ | |||
|id=chr13:19756206..19756226,+ | |||
|ontology_enrichment_celltype=CL:1000415!2.15e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0000054;3.02e-11;2!CL:0000137;3.02e-11;2!CL:0000092;3.02e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,3.02e-11,2;CL:0000137,3.02e-11,2;CL:0000092,3.02e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.28e-09;10!UBERON:0005564;8.28e-09;10 | |||
|ontology_enrichment_disease=DOID:0060085!1.21e-09!1;DOID:3165!1.21e-09!1;DOID:0060121!1.21e-09!1;DOID:2438!1.21e-09!1;DOID:4418!1.21e-09!1;DOID:1036!2.55e-09!8 | |||
|ontology_enrichment_disease_v019=DOID:0060085;4.22e-21;1!DOID:3165;4.22e-21;1!DOID:0060121;4.22e-21;1!DOID:2438;4.22e-21;1!DOID:4418;4.22e-21;1!DOID:200;3.02e-11;2!DOID:4305;3.02e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,4.22e-21,1;DOID:3165,4.22e-21,1;DOID:0060121,4.22e-21,1;DOID:2438,4.22e-21,1;DOID:4418,4.22e-21,1;DOID:200,3.02e-11,2;DOID:4305,3.02e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0002110!3.01e-11!3;UBERON:0006242!3.01e-11!3;UBERON:0002294!1.08e-10!7;UBERON:0001173!1.08e-10!7;UBERON:0004912!1.08e-10!7;UBERON:0001282!1.56e-09!1;UBERON:0009842!1.56e-09!1;UBERON:0003704!1.56e-09!1;UBERON:0001171!1.56e-09!1;UBERON:0001172!1.56e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;6.98e-21;1!UBERON:0009842;6.98e-21;1!UBERON:0003704;6.98e-21;1!UBERON:0001171;6.98e-21;1!UBERON:0001172;6.98e-21;1!UBERON:0000473;8.90e-11;8!UBERON:0003135;4.34e-08;11!UBERON:0001280;7.50e-08;3!UBERON:0004647;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,7.72e-21,1;UBERON:0009842,7.72e-21,1;UBERON:0003704,7.72e-21,1;UBERON:0001171,7.72e-21,1;UBERON:0001172,7.72e-21,1;UBERON:0000473,8.90e-11,8;UBERON:0003135,4.34e-08,11;UBERON:0001280,7.76e-08,3;UBERON:0004647,7.76e-08,3;UBERON:0005171,7.76e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,5.90649936670635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97421581475578,2.38457534043588,0,0.195551382734803,0.0801588202515337,0,0.999048047910651,0,0,0,0,0,0,0.67952103036807,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,9.68296996299927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12363907502212,0,0,0,0,12.5299160160339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,1.87574891109325,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.246301768349837,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,5.90649936670635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97421581475578,2.38457534043588,0,0.195551382734803,0.0801588202515337,0,0.999048047910651,0,0,0,0,0,0,0.67952103036807,1.67364554099733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,9.68296996299927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.12363907502212,0,0,0,0,12.5299160160339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,1.87574891109325,0,0,0,0,0,0,0.784923038064294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:19756206..19756226,+ | |||
}} | }} |
Latest revision as of 14:55, 24 July 2015
Short description: | p@chr13:19756206..19756226, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:19756206..19756226, + |
Coexpression cluster: | C1701_small_lymphangiectasia_adult_testis_fibrosarcoma_fibrous_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 3.02e-11 | 2 |
osteocyte | 3.02e-11 | 2 |
osteoclast | 3.02e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 7.72e-21 | 1 |
acinus | 7.72e-21 | 1 |
intrahepatic bile duct | 7.72e-21 | 1 |
portal lobule | 7.72e-21 | 1 |
hepatic acinus | 7.72e-21 | 1 |
testis | 8.90e-11 | 8 |
male reproductive organ | 4.34e-08 | 11 |
liver parenchyma | 7.76e-08 | 3 |
liver lobule | 7.76e-08 | 3 |
hepatic duct | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 4.22e-21 | 1 |
skin benign neoplasm | 4.22e-21 | 1 |
integumentary system benign neoplasm | 4.22e-21 | 1 |
dermis tumor | 4.22e-21 | 1 |
cutaneous fibrous histiocytoma | 4.22e-21 | 1 |
giant cell tumor | 3.02e-11 | 2 |
bone giant cell tumor | 3.02e-11 | 2 |