FFCP PHASE1:Hg19::chr22:38713394..38713415,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1454 | |EntrezGene=1454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2453 | |HGNC=2453 | ||
|TSSclassifier=strong | |||
|UniProt=P49674,B0QY34,Q5U045,B0QY35 | |UniProt=P49674,B0QY34,Q5U045,B0QY35 | ||
|association_with_transcript=0bp_to_ENST00000396832,ENST00000413574,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | |association_with_transcript=0bp_to_ENST00000396832,ENST00000413574,NM_152221,uc003avj.2,uc003avl.1,uc003avp.1,uc003avq.1_5end | ||
|cluster_id=chr22:38713394..38713415,- | |||
|description=CAGE_peak_3_at_CSNK1E_5end | |description=CAGE_peak_3_at_CSNK1E_5end | ||
|id=chr22:38713394..38713415,- | |id=chr22:38713394..38713415,- | ||
|ontology_enrichment_celltype=CL:0000066!5.91e-11!254;CL:0002321!7.55e-11!248;CL:0000220!2.08e-10!246;CL:0000221!2.11e-09!71;CL:0000133!8.70e-08!59;CL:0000333!6.05e-07!41 | |ontology_enrichment_celltype=CL:0000066!5.91e-11!254;CL:0002321!7.55e-11!248;CL:0000220!2.08e-10!246;CL:0000221!2.11e-09!71;CL:0000133!8.70e-08!59;CL:0000333!6.05e-07!41 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.13e-10,250;CL:0000066,7.80e-10,253;CL:0000221,3.59e-09,72;CL:0000133,1.87e-07,59;CL:0000333,6.78e-07,41 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!3.63e-16!312;UBERON:0000483!4.84e-16!309;UBERON:0000481!3.55e-12!347;UBERON:0000475!1.81e-11!365;UBERON:0000468!2.10e-10!659;UBERON:0000467!5.89e-10!625;UBERON:0000922!6.22e-10!612;UBERON:0000480!9.87e-10!626;UBERON:0000064!9.98e-10!219;UBERON:0000025!3.77e-09!194;UBERON:0004111!7.34e-09!241;UBERON:0000923!1.17e-08!604;UBERON:0005291!1.17e-08!604;UBERON:0006598!1.17e-08!604;UBERON:0002532!1.17e-08!604;UBERON:0002050!1.63e-08!605;UBERON:0005423!1.63e-08!605;UBERON:0000477!8.45e-08!286;UBERON:0001048!1.65e-07!168;UBERON:0003914!4.06e-07!118;UBERON:0004121!5.55e-07!169;UBERON:0000464!9.98e-07!104 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,9.68e-17,309;UBERON:0000483,1.30e-16,306;UBERON:0000025,1.40e-09,192;UBERON:0004111,6.39e-09,240;UBERON:0000922,7.97e-09,592;UBERON:0003914,1.03e-07,117;UBERON:0010314,2.84e-07,132;UBERON:0001048,3.96e-07,160 | |||
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| ||
|short_description=p3@CSNK1E | |short_description=p3@CSNK1E | ||
}} | }} |
Latest revision as of 07:55, 20 September 2015
Short description: | p3@CSNK1E |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CSNK1E_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396832, ENST00000413574, NM_152221, uc003avj.2, uc003avl.1, uc003avp.1, uc003avq.1_5end |
EntrezGene: | CSNK1E |
HGNC: | 2453 |
UniProt: | P49674B0QY34Q5U045B0QY35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.13e-10 | 250 |
epithelial cell | 7.80e-10 | 253 |
ectodermal cell | 3.59e-09 | 72 |
neurectodermal cell | 1.87e-07 | 59 |
migratory neural crest cell | 6.78e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
cell layer | 9.68e-17 | 309 |
epithelium | 1.30e-16 | 306 |
tube | 1.40e-09 | 192 |
anatomical conduit | 6.39e-09 | 240 |
embryo | 7.97e-09 | 592 |
epithelial tube | 1.03e-07 | 117 |
structure with developmental contribution from neural crest | 2.84e-07 | 132 |
primordium | 3.96e-07 | 160 |