FFCP PHASE1:Hg19::chr22:43523673..43523685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:43523673..43523685,+ | |||
|description=CAGE_peak_at_chr22:43523673..43523685,+ | |description=CAGE_peak_at_chr22:43523673..43523685,+ | ||
|id=chr22:43523673..43523685,+ | |id=chr22:43523673..43523685,+ | ||
|ontology_enrichment_celltype=CL:0002076!3.25e-24!43;CL:0000066!8.55e-23!254;CL:0002368!2.27e-22!13;CL:0000223!2.88e-17!59;CL:0002202!4.12e-15!9;CL:0002632!4.12e-15!9;CL:0000068!5.83e-08!3;CL:0000069!5.83e-08!3;CL:0000307!5.83e-08!3;CL:0000377!5.83e-08!3;CL:0002251!6.56e-08!21;CL:0002328!8.86e-08!3;CL:0002166!5.16e-07!3;CL:0002621!8.94e-07!3 | |ontology_enrichment_celltype=CL:0002076!3.25e-24!43;CL:0000066!8.55e-23!254;CL:0002368!2.27e-22!13;CL:0000223!2.88e-17!59;CL:0002202!4.12e-15!9;CL:0002632!4.12e-15!9;CL:0000068!5.83e-08!3;CL:0000069!5.83e-08!3;CL:0000307!5.83e-08!3;CL:0000377!5.83e-08!3;CL:0002251!6.56e-08!21;CL:0002328!8.86e-08!3;CL:0002166!5.16e-07!3;CL:0002621!8.94e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002202;3.72e-21;9!CL:0002632;3.72e-21;9!CL:0002368;1.81e-19;13!CL:0000307;4.47e-17;3!CL:0002328;1.02e-16;3!CL:0002076;9.70e-12;42!CL:0002252;9.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,5.19e-21,9;CL:0002632,5.19e-21,9;CL:0002368,2.57e-19,13;CL:0000068,5.26e-17,3;CL:0000069,5.26e-17,3;CL:0000307,5.26e-17,3;CL:0000377,5.26e-17,3;CL:0002328,1.44e-16,3;CL:0002076,1.03e-15,42;CL:0000066,1.79e-13,253;CL:0000223,1.05e-12,58;CL:0002252,9.67e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000377;4.47e-17;3!CL:0000223;4.98e-08;58 | |||
|ontology_enrichment_disease=DOID:305!1.86e-18!106;DOID:1749!1.86e-16!14;DOID:0050687!8.88e-13!143;DOID:162!6.04e-12!235;DOID:14566!2.08e-11!239 | |ontology_enrichment_disease=DOID:305!1.86e-18!106;DOID:1749!1.86e-16!14;DOID:0050687!8.88e-13!143;DOID:162!6.04e-12!235;DOID:14566!2.08e-11!239 | ||
|ontology_enrichment_disease_v019=DOID:1749;9.53e-13;14!DOID:3493;1.01e-11;2!DOID:299;3.29e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.40e-13,14;DOID:305,4.92e-12,106;DOID:3493,8.83e-12,2;DOID:0050687,3.40e-10,143;DOID:299,3.17e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.65e-19!169;UBERON:0000925!1.65e-19!169;UBERON:0006595!1.65e-19!169;UBERON:0001004!6.12e-16!72;UBERON:0000065!2.14e-14!53;UBERON:0001007!4.49e-14!155;UBERON:0001555!4.49e-14!155;UBERON:0007026!4.49e-14!155;UBERON:0007196!5.62e-14!14;UBERON:0001558!5.62e-14!14;UBERON:0004921!2.35e-11!129;UBERON:0004185!2.35e-11!129;UBERON:0000072!3.72e-11!46;UBERON:0002294!8.31e-11!7;UBERON:0001173!8.31e-11!7;UBERON:0004912!8.31e-11!7;UBERON:0008947!5.45e-10!38;UBERON:0003258!5.45e-10!38;UBERON:0005911!7.82e-10!82;UBERON:0000077!9.53e-10!130;UBERON:0003126!6.48e-08!7;UBERON:0001005!6.48e-08!7;UBERON:0005178!6.49e-08!34;UBERON:0002224!6.49e-08!34;UBERON:0004815!8.86e-08!3;UBERON:0002031!8.86e-08!3;UBERON:0005181!1.34e-07!35;UBERON:0001949!8.94e-07!3;UBERON:0001041!8.99e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.02e-16;3!UBERON:0002031;1.02e-16;3!UBERON:0007196;1.33e-16;15!UBERON:0001558;1.33e-16;15!UBERON:0002394;1.34e-12;4!UBERON:0003928;1.34e-12;4!UBERON:0003126;1.93e-12;7!UBERON:0001005;1.93e-12;7!UBERON:0002294;3.41e-12;7!UBERON:0001173;3.41e-12;7!UBERON:0005178;9.82e-11;34!UBERON:0002224;9.82e-11;34!UBERON:0002185;3.16e-10;5!UBERON:0005181;1.85e-09;35!UBERON:0005910;3.43e-08;6!UBERON:0000072;1.34e-07;37!UBERON:0000485;2.01e-07;7!UBERON:0005911;3.42e-07;36!UBERON:0000486;6.47e-07;12!UBERON:0004913;6.95e-07;1!UBERON:0003703;6.95e-07;1!UBERON:0001174;6.95e-07;1!UBERON:0004914;6.95e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.44e-16,3;UBERON:0002031,1.44e-16,3;UBERON:0007196,2.06e-16,15;UBERON:0001558,2.06e-16,15;UBERON:0003126,2.74e-12,7;UBERON:0001005,2.74e-12,7;UBERON:0005178,5.16e-11,34;UBERON:0002224,5.16e-11,34;UBERON:0005181,1.18e-10,35;UBERON:0002185,3.87e-10,5;UBERON:0004119,1.26e-09,160;UBERON:0000925,1.26e-09,160;UBERON:0006595,1.26e-09,160;UBERON:0002294,1.38e-09,9;UBERON:0001173,1.38e-09,9;UBERON:0004912,1.38e-09,9;UBERON:0001041,7.04e-09,87;UBERON:0002394,1.41e-08,6;UBERON:0003928,1.41e-08,6;UBERON:0005910,2.23e-08,6;UBERON:0000065,7.56e-08,54;UBERON:0004921,7.86e-08,118;UBERON:0001004,1.22e-07,74;UBERON:0008947,1.24e-07,38;UBERON:0003258,1.24e-07,38;UBERON:0001007,1.25e-07,145;UBERON:0001555,1.25e-07,145;UBERON:0007026,1.25e-07,145;UBERON:0000072,1.73e-07,47;UBERON:0004913,6.59e-07,1;UBERON:0003703,6.59e-07,1;UBERON:0001174,6.59e-07,1;UBERON:0004914,6.59e-07,1;UBERON:0005911,9.83e-07,82 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.0330546937471,4.819294700452,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.09098448236334,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.51183915378974,0.425325291727159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.0920809889358963,0,0,0,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14870389969272,0.960950336825531,0.765676274967505,0.809262246844399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.30933070541229,7.37332503089366,8.71127878890581,0,0,1.68471475667626,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.432807638929335,0.0711418433484141,0.318852545457645,0,0,0,0,0,0,0.313359791546046,0,0,0,0,0,0,0.307240764308458,0,0.500547425135725,0,0,0,0,0.33307196799782,0,2.43282702530686,0,0,1.33732061132974,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,4.49341755736634,1.43216939740487,0,0,0,0,0,0,0,0,0,0,6.14484620741698,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0.41827123283581,0,0,1.61394733071642,0,2.06430006651815,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.530745387020035,0,0,0,0,0,0,0,0,2.73930466504926,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,1.37189356380129,0.34823682632161,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,1.56441106187842,0.160317640503067,0.426905989478705,0,0,0,0,0,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487170393523584,7.66009509324218,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0,0,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392590874004102,0,0.366857197043358,1.5018336599544,0,0,0,0,0,0,0,0,7.68851648328635,0,0,0,0,0,0,0,0,0.894336993477167,0,0,0,0,0,0,0,0,0,0.236387681767936,0.222462803784138,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0807022159382,0,0,0.111855431797792,3.14080747568778,2.56027642462766,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0,0,0,1.42843150884526,0,1.44434460040503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0.129177819672012,0,0,0,0,0,0.342233301085281,0,1.00411087549747,0.332660356546013,1.87227517805241,2.34800160930974,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr22:43523673..43523685,+ | |short_description=p@chr22:43523673..43523685,+ | ||
}} | }} |
Latest revision as of 21:52, 28 July 2015
Short description: | p@chr22:43523673..43523685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:43523673..43523685, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 5.19e-21 | 9 |
epithelial cell of lower respiratory tract | 5.19e-21 | 9 |
respiratory epithelial cell | 2.57e-19 | 13 |
duct epithelial cell | 5.26e-17 | 3 |
branched duct epithelial cell | 5.26e-17 | 3 |
tracheal epithelial cell | 5.26e-17 | 3 |
tracheoblast | 5.26e-17 | 3 |
bronchial epithelial cell | 1.44e-16 | 3 |
endo-epithelial cell | 1.03e-15 | 42 |
epithelial cell | 1.79e-13 | 253 |
endodermal cell | 1.05e-12 | 58 |
epithelial cell of esophagus | 9.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.44e-16 | 3 |
epithelium of bronchus | 1.44e-16 | 3 |
tracheobronchial tree | 2.06e-16 | 15 |
lower respiratory tract | 2.06e-16 | 15 |
trachea | 2.74e-12 | 7 |
respiratory airway | 2.74e-12 | 7 |
thoracic cavity element | 5.16e-11 | 34 |
thoracic cavity | 5.16e-11 | 34 |
thoracic segment organ | 1.18e-10 | 35 |
bronchus | 3.87e-10 | 5 |
endoderm-derived structure | 1.26e-09 | 160 |
endoderm | 1.26e-09 | 160 |
presumptive endoderm | 1.26e-09 | 160 |
biliary system | 1.38e-09 | 9 |
biliary tree | 1.38e-09 | 9 |
biliary bud | 1.38e-09 | 9 |
foregut | 7.04e-09 | 87 |
bile duct | 1.41e-08 | 6 |
digestive system duct | 1.41e-08 | 6 |
transitional epithelium | 2.23e-08 | 6 |
respiratory tract | 7.56e-08 | 54 |
subdivision of digestive tract | 7.86e-08 | 118 |
respiratory system | 1.22e-07 | 74 |
respiratory primordium | 1.24e-07 | 38 |
endoderm of foregut | 1.24e-07 | 38 |
digestive system | 1.25e-07 | 145 |
digestive tract | 1.25e-07 | 145 |
primitive gut | 1.25e-07 | 145 |
segment of respiratory tract | 1.73e-07 | 47 |
hepatopancreatic ampulla | 6.59e-07 | 1 |
extrahepatic bile duct | 6.59e-07 | 1 |
common bile duct | 6.59e-07 | 1 |
duodenal papilla | 6.59e-07 | 1 |
endo-epithelium | 9.83e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.40e-13 | 14 |
carcinoma | 4.92e-12 | 106 |
signet ring cell adenocarcinoma | 8.83e-12 | 2 |
cell type cancer | 3.40e-10 | 143 |
adenocarcinoma | 3.17e-07 | 25 |