FFCP PHASE1:Hg19::chr22:50260492..50260508,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:50260492..50260508,+ | |||
|coexpression_cluster_id=C796 | |||
|description=CAGE_peak_at_chr22:50260492..50260508,+ | |description=CAGE_peak_at_chr22:50260492..50260508,+ | ||
|id=chr22:50260492..50260508,+ | |id=chr22:50260492..50260508,+ | ||
|ontology_enrichment_celltype=CL:0002127!2.35e-09!1;CL:0000914!2.35e-09!1;CL:0000911!2.35e-09!1;CL:0000814!2.35e-09!1;CL:0002042!2.35e-09!1;CL:0002039!2.35e-09!1;CL:0002040!2.35e-09!1;CL:0002041!2.35e-09!1;CL:0000084!3.94e-08!25;CL:0000827!3.94e-08!25;CL:0000838!5.68e-07!52;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53 | |ontology_enrichment_celltype=CL:0002127!2.35e-09!1;CL:0000914!2.35e-09!1;CL:0000911!2.35e-09!1;CL:0000814!2.35e-09!1;CL:0002042!2.35e-09!1;CL:0002039!2.35e-09!1;CL:0002040!2.35e-09!1;CL:0002041!2.35e-09!1;CL:0000084!3.94e-08!25;CL:0000827!3.94e-08!25;CL:0000838!5.68e-07!52;CL:0000542!7.96e-07!53;CL:0000051!7.96e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.64e-17;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.64e-17,25;CL:0000827,4.64e-17,25;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!1.77e-09!39;DOID:2531!4.64e-07!51;DOID:0060083!4.64e-07!51 | |ontology_enrichment_disease=DOID:1240!1.77e-09!39;DOID:2531!4.64e-07!51;DOID:0060083!4.64e-07!51 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.07e-13;8!DOID:1240;3.67e-09;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.07e-13,8;DOID:1240,2.03e-11,39;DOID:2531,4.95e-09,51;DOID:0060083,4.95e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.51e-11!3;UBERON:0004854!1.51e-11!3;UBERON:0009034!1.51e-11!3;UBERON:0002095!1.51e-11!3;UBERON:0004782!1.51e-11!3;UBERON:0003281!1.51e-11!3;UBERON:0009664!1.51e-11!3;UBERON:0002296!1.51e-11!3;UBERON:0005602!1.51e-11!3;UBERON:0001179!1.51e-11!3;UBERON:0006293!1.51e-11!3;UBERON:0004177!8.24e-11!7;UBERON:0002171!9.44e-10!1;UBERON:0006518!9.44e-10!1;UBERON:0008949!9.44e-10!1;UBERON:0000101!9.44e-10!1;UBERON:0002167!9.44e-10!1;UBERON:0005418!1.21e-09!1;UBERON:0001389!1.21e-09!1;UBERON:0000026!1.21e-09!1;UBERON:0008784!1.21e-09!1;UBERON:0006058!1.21e-09!1;UBERON:0003663!1.21e-09!1;UBERON:0001383!1.21e-09!1;UBERON:0004256!1.21e-09!1;UBERON:0002529!1.21e-09!1;UBERON:0004708!1.21e-09!1;UBERON:0002101!1.21e-09!1;UBERON:0004709!1.21e-09!1;UBERON:0003661!1.21e-09!1;UBERON:0002471!1.21e-09!1;UBERON:0004357!1.21e-09!1;UBERON:0009872!1.21e-09!1;UBERON:0004347!1.21e-09!1;UBERON:0005420!1.21e-09!1;UBERON:0005732!1.21e-09!1;UBERON:0006057!1.21e-09!1;UBERON:0000978!1.21e-09!1;UBERON:0002103!1.21e-09!1;UBERON:0001665!1.21e-09!1;UBERON:0003823!1.21e-09!1;UBERON:0000154!1.21e-09!1;UBERON:0005733!1.21e-09!1;UBERON:0005730!1.21e-09!1;UBERON:0000945!1.23e-09!8;UBERON:0010039!1.23e-09!8;UBERON:0001301!2.77e-09!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr22:50260492..50260508,+ | |short_description=p@chr22:50260492..50260508,+ | ||
}} | }} |
Latest revision as of 22:19, 28 July 2015
Short description: | p@chr22:50260492..50260508, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:50260492..50260508, + |
Coexpression cluster: | C796_acute_chronic_spleen_CD4_CD19_thymus_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.64e-17 | 25 |
pro-T cell | 4.64e-17 | 25 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.07e-13 | 8 |
leukemia | 2.03e-11 | 39 |
hematologic cancer | 4.95e-09 | 51 |
immune system cancer | 4.95e-09 | 51 |