FFCP PHASE1:Hg19::chr7:47510300..47510312,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:47510300..47510312,- | |||
|description=CAGE_peak_at_chr7:47510300..47510312,- | |description=CAGE_peak_at_chr7:47510300..47510312,- | ||
|id=chr7:47510300..47510312,- | |id=chr7:47510300..47510312,- | ||
|ontology_enrichment_celltype=CL:0000181!4.88e-11!12;CL:0000417!4.88e-11!12;CL:0000668!4.88e-11!12;CL:0000414!4.88e-11!12;CL:0000412!4.88e-11!12;CL:0000182!4.88e-11!12;CL:0000223!6.81e-09!59;CL:0002149!1.01e-08!6;CL:0002255!1.01e-08!6;CL:0002603!2.97e-08!3;CL:0000064!4.72e-08!3;CL:0005012!4.72e-08!3;CL:0000067!4.72e-08!3;CL:0002304!4.72e-08!3;CL:0002178!6.49e-08!3 | |ontology_enrichment_celltype=CL:0000181!4.88e-11!12;CL:0000417!4.88e-11!12;CL:0000668!4.88e-11!12;CL:0000414!4.88e-11!12;CL:0000412!4.88e-11!12;CL:0000182!4.88e-11!12;CL:0000223!6.81e-09!59;CL:0002149!1.01e-08!6;CL:0002255!1.01e-08!6;CL:0002603!2.97e-08!3;CL:0000064!4.72e-08!3;CL:0005012!4.72e-08!3;CL:0000067!4.72e-08!3;CL:0002304!4.72e-08!3;CL:0002178!6.49e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.22e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.16e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.28e-09;10!UBERON:0007687;8.28e-09;10 | |||
|ontology_enrichment_disease=DOID:3493!1.31e-11!2;DOID:299!1.13e-09!25;DOID:3001!1.01e-08!6;DOID:0050619!5.75e-07!1;DOID:1357!5.75e-07!1;DOID:305!7.12e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:0050619;6.98e-21;1!DOID:1357;6.98e-21;1!DOID:3493;2.60e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,5.16e-21,1;DOID:1357,5.16e-21,1;DOID:3493,2.73e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004175!1.38e-12!25;UBERON:0000995!8.77e-12!21;UBERON:0005795!3.32e-11!22;UBERON:0003975!3.32e-11!22;UBERON:0003134!3.49e-10!37;UBERON:0000474!3.49e-10!37;UBERON:0002107!9.53e-10!19;UBERON:0006925!9.53e-10!19;UBERON:0008836!9.53e-10!19;UBERON:0003133!2.88e-09!48;UBERON:0003100!4.83e-09!41;UBERON:0008835!2.46e-08!22;UBERON:0003894!2.46e-08!22;UBERON:0001778!4.72e-08!3;UBERON:0001775!4.72e-08!3;UBERON:0009854!6.03e-08!23;UBERON:0007499!2.92e-07!25;UBERON:0009497!2.92e-07!25;UBERON:0000015!2.92e-07!25;UBERON:0002423!2.92e-07!25;UBERON:0006235!2.92e-07!25;UBERON:0004161!2.92e-07!25;UBERON:0005156!3.27e-07!59;UBERON:0000990!3.27e-07!59;UBERON:0001764!5.75e-07!1;UBERON:0001825!5.75e-07!1;UBERON:0005057!5.86e-07!26;UBERON:0009856!5.86e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;6.98e-21;1!UBERON:0001825;6.98e-21;1!UBERON:0002107;3.92e-10;19!UBERON:0006925;3.92e-10;19!UBERON:0002423;7.66e-08;25!UBERON:0005172;1.15e-07;52!UBERON:0005173;1.15e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,5.16e-21,1;UBERON:0001825,5.16e-21,1;UBERON:0002107,3.68e-10,19;UBERON:0006925,3.68e-10,19;UBERON:0008836,3.68e-10,19;UBERON:0005172,2.58e-09,54;UBERON:0005173,2.58e-09,54;UBERON:0008835,7.41e-09,22;UBERON:0003894,7.41e-09,22;UBERON:0009854,1.70e-08,23;UBERON:0002417,2.17e-08,60;UBERON:0000916,2.17e-08,60;UBERON:0007499,7.31e-08,25;UBERON:0009497,7.31e-08,25;UBERON:0000015,7.31e-08,25;UBERON:0002423,7.31e-08,25;UBERON:0006235,7.31e-08,25;UBERON:0004161,7.31e-08,25;UBERON:0009856,1.40e-07,26 | |||
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|short_description=p@chr7:47510300..47510312,- | |short_description=p@chr7:47510300..47510312,- | ||
}} | }} |
Latest revision as of 10:30, 31 July 2015
Short description: | p@chr7:47510300..47510312, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:47510300..47510312, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.16e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 5.16e-21 | 1 |
paranasal sinus | 5.16e-21 | 1 |
liver | 3.68e-10 | 19 |
digestive gland | 3.68e-10 | 19 |
liver bud | 3.68e-10 | 19 |
abdomen element | 2.58e-09 | 54 |
abdominal segment element | 2.58e-09 | 54 |
hepatic diverticulum | 7.41e-09 | 22 |
liver primordium | 7.41e-09 | 22 |
digestive tract diverticulum | 1.70e-08 | 23 |
abdominal segment of trunk | 2.17e-08 | 60 |
abdomen | 2.17e-08 | 60 |
epithelial sac | 7.31e-08 | 25 |
epithelium of foregut-midgut junction | 7.31e-08 | 25 |
anatomical boundary | 7.31e-08 | 25 |
hepatobiliary system | 7.31e-08 | 25 |
foregut-midgut junction | 7.31e-08 | 25 |
septum transversum | 7.31e-08 | 25 |
sac | 1.40e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 5.16e-21 | 1 |
maxillary sinus cancer | 5.16e-21 | 1 |
signet ring cell adenocarcinoma | 2.73e-11 | 2 |