FFCP PHASE1:Hg19::chr2:135170403..135170416,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:135170403..135170416,+ | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr2:135170403..135170416,+ | |description=CAGE_peak_at_chr2:135170403..135170416,+ | ||
|id=chr2:135170403..135170416,+ | |id=chr2:135170403..135170416,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002379;7.62e-26;1!CL:0002178;1.53e-09;3!CL:0000182;3.41e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002379,1.26e-25,1;CL:0002178,1.41e-09,3;CL:0000182,3.55e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0008801;3.15e-26;1!UBERON:0004161;6.06e-10;11!UBERON:0009497;1.47e-08;13!UBERON:0001041;4.17e-08;30 | |||
|ontology_enrichment_disease=DOID:3493!1.30e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:3620;7.62e-26;1!DOID:3565;7.62e-26;1!DOID:1909;6.43e-14;2!DOID:3493;1.21e-13;2!DOID:5409;1.44e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.26e-25,1;DOID:3565,1.26e-25,1;DOID:1909,6.43e-14,2;DOID:3493,1.07e-13,2;DOID:5409,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.14e-35!57;UBERON:0005068!1.14e-35!57;UBERON:0006241!1.14e-35!57;UBERON:0007135!1.14e-35!57;UBERON:0002780!1.97e-28!41;UBERON:0001890!1.97e-28!41;UBERON:0006240!1.97e-28!41;UBERON:0002616!2.61e-28!59;UBERON:0003080!1.16e-27!42;UBERON:0000955!2.79e-25!69;UBERON:0006238!2.79e-25!69;UBERON:0001017!8.87e-25!82;UBERON:0001893!2.56e-24!34;UBERON:0005743!2.30e-23!86;UBERON:0007023!2.46e-23!115;UBERON:0002791!4.78e-22!33;UBERON:0003075!9.65e-22!86;UBERON:0007284!9.65e-22!86;UBERON:0000073!1.29e-20!94;UBERON:0001016!1.29e-20!94;UBERON:0002346!1.61e-20!90;UBERON:0001869!1.83e-19!32;UBERON:0002020!2.30e-18!34;UBERON:0003528!2.30e-18!34;UBERON:0003056!8.61e-18!61;UBERON:0000153!1.94e-16!129;UBERON:0007811!1.94e-16!129;UBERON:0000033!4.52e-16!123;UBERON:0002619!9.77e-15!22;UBERON:0000025!3.14e-14!194;UBERON:0001950!3.03e-13!20;UBERON:0000956!8.09e-13!25;UBERON:0000203!8.09e-13!25;UBERON:0001896!2.42e-12!3;UBERON:0005290!2.42e-12!3;UBERON:0010096!2.42e-12!3;UBERON:0004121!3.16e-12!169;UBERON:0002298!3.43e-12!8;UBERON:0004111!5.90e-12!241;UBERON:0000924!8.50e-12!173;UBERON:0006601!8.50e-12!173;UBERON:0002420!1.30e-10!9;UBERON:0007245!1.30e-10!9;UBERON:0010009!1.30e-10!9;UBERON:0010011!1.30e-10!9;UBERON:0000454!1.30e-10!9;UBERON:0000477!2.01e-10!286;UBERON:0000200!2.48e-10!6;UBERON:0009663!3.76e-09!7;UBERON:0003076!4.60e-09!15;UBERON:0003057!4.60e-09!15;UBERON:0000475!2.26e-08!365;UBERON:0001871!7.64e-08!7;UBERON:0005174!8.14e-08!5;UBERON:0001137!8.14e-08!5;UBERON:0001872!1.39e-07!5;UBERON:0000349!3.45e-07!5;UBERON:0002308!3.96e-07!9;UBERON:0000125!3.96e-07!9;UBERON:0000483!6.52e-07!309;UBERON:0000119!8.92e-07!312 | |ontology_enrichment_uberon=UBERON:0001049!1.14e-35!57;UBERON:0005068!1.14e-35!57;UBERON:0006241!1.14e-35!57;UBERON:0007135!1.14e-35!57;UBERON:0002780!1.97e-28!41;UBERON:0001890!1.97e-28!41;UBERON:0006240!1.97e-28!41;UBERON:0002616!2.61e-28!59;UBERON:0003080!1.16e-27!42;UBERON:0000955!2.79e-25!69;UBERON:0006238!2.79e-25!69;UBERON:0001017!8.87e-25!82;UBERON:0001893!2.56e-24!34;UBERON:0005743!2.30e-23!86;UBERON:0007023!2.46e-23!115;UBERON:0002791!4.78e-22!33;UBERON:0003075!9.65e-22!86;UBERON:0007284!9.65e-22!86;UBERON:0000073!1.29e-20!94;UBERON:0001016!1.29e-20!94;UBERON:0002346!1.61e-20!90;UBERON:0001869!1.83e-19!32;UBERON:0002020!2.30e-18!34;UBERON:0003528!2.30e-18!34;UBERON:0003056!8.61e-18!61;UBERON:0000153!1.94e-16!129;UBERON:0007811!1.94e-16!129;UBERON:0000033!4.52e-16!123;UBERON:0002619!9.77e-15!22;UBERON:0000025!3.14e-14!194;UBERON:0001950!3.03e-13!20;UBERON:0000956!8.09e-13!25;UBERON:0000203!8.09e-13!25;UBERON:0001896!2.42e-12!3;UBERON:0005290!2.42e-12!3;UBERON:0010096!2.42e-12!3;UBERON:0004121!3.16e-12!169;UBERON:0002298!3.43e-12!8;UBERON:0004111!5.90e-12!241;UBERON:0000924!8.50e-12!173;UBERON:0006601!8.50e-12!173;UBERON:0002420!1.30e-10!9;UBERON:0007245!1.30e-10!9;UBERON:0010009!1.30e-10!9;UBERON:0010011!1.30e-10!9;UBERON:0000454!1.30e-10!9;UBERON:0000477!2.01e-10!286;UBERON:0000200!2.48e-10!6;UBERON:0009663!3.76e-09!7;UBERON:0003076!4.60e-09!15;UBERON:0003057!4.60e-09!15;UBERON:0000475!2.26e-08!365;UBERON:0001871!7.64e-08!7;UBERON:0005174!8.14e-08!5;UBERON:0001137!8.14e-08!5;UBERON:0001872!1.39e-07!5;UBERON:0000349!3.45e-07!5;UBERON:0002308!3.96e-07!9;UBERON:0000125!3.96e-07!9;UBERON:0000483!6.52e-07!309;UBERON:0000119!8.92e-07!312 | ||
|ontology_enrichment_uberon_v019=UBERON:0001831;3.15e-26;1!UBERON:0001567;3.15e-26;1!UBERON:0001044;1.64e-17;6!UBERON:0003293;1.64e-17;6!UBERON:0003294;1.64e-17;6!UBERON:0010047;1.64e-17;6!UBERON:0003408;1.64e-17;6!UBERON:0000167;1.64e-17;6!UBERON:0001041;1.37e-16;14!UBERON:0001829;7.77e-14;2!UBERON:0004089;7.77e-14;2!UBERON:0002365;4.46e-13;31!UBERON:0002330;4.46e-13;31!UBERON:0004921;6.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001831,2.78e-26,1;UBERON:0001567,2.78e-26,1;UBERON:0008801,2.78e-26,1;UBERON:0001044,1.33e-17,6;UBERON:0003293,1.33e-17,6;UBERON:0003294,1.33e-17,6;UBERON:0010047,1.33e-17,6;UBERON:0000167,1.33e-17,6;UBERON:0001829,7.30e-14,2;UBERON:0004089,7.30e-14,2;UBERON:0002365,3.17e-13,31;UBERON:0002330,3.17e-13,31;UBERON:0003408,5.69e-11,10;UBERON:0001041,2.32e-10,87;UBERON:0004921,1.39e-07,118;UBERON:0002530,3.87e-07,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,1.57566364614447,0.824158583811665,1.48287796479207,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.248385611765534,0,0,5.15606999641603,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,2.19303106742873,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,1.66855397145913,0.609589624911347,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0,0,0.785233868459781,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0.358042349351218,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,1.57566364614447,0.824158583811665,1.48287796479207,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0.110929051536852,0.248385611765534,0,0,5.15606999641603,0,1.41159491818903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,2.19303106742873,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,1.66855397145913,0.609589624911347,0,0,0,0,0,0,0,2.03302947670128,0,0,0,0,0,0,0,0.785233868459781,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310298987585686,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:135170403..135170416,+ | |short_description=p@chr2:135170403..135170416,+ | ||
}} | }} |
Latest revision as of 00:31, 29 July 2015
Short description: | p@chr2:135170403..135170416, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:135170403..135170416, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.26e-25 | 1 |
epithelial cell of stomach | 1.41e-09 | 3 |
hepatocyte | 3.55e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
parotid gland | 2.78e-26 | 1 |
cheek | 2.78e-26 | 1 |
parotid gland primordium | 2.78e-26 | 1 |
saliva-secreting gland | 1.33e-17 | 6 |
gland of oral region | 1.33e-17 | 6 |
gland of foregut | 1.33e-17 | 6 |
oral gland | 1.33e-17 | 6 |
oral cavity | 1.33e-17 | 6 |
major salivary gland | 7.30e-14 | 2 |
midface | 7.30e-14 | 2 |
exocrine gland | 3.17e-13 | 31 |
exocrine system | 3.17e-13 | 31 |
gland of gut | 5.69e-11 | 10 |
foregut | 2.32e-10 | 87 |
subdivision of digestive tract | 1.39e-07 | 118 |
gland | 3.87e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.26e-25 | 1 |
meningioma | 1.26e-25 | 1 |
melanoma | 6.43e-14 | 2 |
signet ring cell adenocarcinoma | 1.07e-13 | 2 |
lung small cell carcinoma | 1.49e-07 | 4 |