FFCP PHASE1:Hg19::chr2:182543992..182543996,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4760 | |EntrezGene=4760 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7762 | |HGNC=7762 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-404bp_to_AB385071,CU679237,DQ891560,DQ894747_5end | |association_with_transcript=-404bp_to_AB385071,CU679237,DQ891560,DQ894747_5end | ||
|cluster_id=chr2:182543992..182543996,- | |||
|description=CAGE_peak_10_at_NEUROD1_5end | |description=CAGE_peak_10_at_NEUROD1_5end | ||
|id=chr2:182543992..182543996,- | |id=chr2:182543992..182543996,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.81e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,3.81e-21,2 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.22e-14;3 | |||
|ontology_enrichment_disease=DOID:3119!1.42e-09!14 | |ontology_enrichment_disease=DOID:3119!1.42e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:154;5.69e-21;2!DOID:4236;5.69e-21;2!DOID:5409;3.42e-11;4!DOID:4362;2.74e-09;5!DOID:1325;6.04e-07;7!DOID:3904;6.04e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:154,6.96e-21,2;DOID:4236,6.96e-21,2;DOID:5409,3.10e-11,4;DOID:4362,2.74e-09,5;DOID:1325,5.70e-07,7;DOID:3904,5.70e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.35e-10!94;UBERON:0001016!8.35e-10!94;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0003075!2.97e-09!86;UBERON:0007284!2.97e-09!86;UBERON:0005743!3.86e-09!86;UBERON:0002346!9.11e-09!90;UBERON:0001017!6.18e-08!82;UBERON:0001049!9.39e-08!57;UBERON:0005068!9.39e-08!57;UBERON:0006241!9.39e-08!57;UBERON:0007135!9.39e-08!57;UBERON:0002616!1.85e-07!59;UBERON:0000966!1.88e-07!5;UBERON:0005388!1.88e-07!5;UBERON:0001802!1.88e-07!5;UBERON:0000349!3.14e-07!5;UBERON:0003056!3.88e-07!61;UBERON:0000033!4.21e-07!123 | |ontology_enrichment_uberon=UBERON:0000073!8.35e-10!94;UBERON:0001016!8.35e-10!94;UBERON:0000955!1.12e-09!69;UBERON:0006238!1.12e-09!69;UBERON:0003075!2.97e-09!86;UBERON:0007284!2.97e-09!86;UBERON:0005743!3.86e-09!86;UBERON:0002346!9.11e-09!90;UBERON:0001017!6.18e-08!82;UBERON:0001049!9.39e-08!57;UBERON:0005068!9.39e-08!57;UBERON:0006241!9.39e-08!57;UBERON:0007135!9.39e-08!57;UBERON:0002616!1.85e-07!59;UBERON:0000966!1.88e-07!5;UBERON:0005388!1.88e-07!5;UBERON:0001802!1.88e-07!5;UBERON:0000349!3.14e-07!5;UBERON:0003056!3.88e-07!61;UBERON:0000033!4.21e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0006955;3.81e-21;2!UBERON:0004801;3.81e-21;2!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0000002;5.92e-08;6!UBERON:0001560;5.92e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006955,3.81e-21,2;UBERON:0004801,3.81e-21,2;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0000002,5.92e-08,6;UBERON:0001560,5.92e-08,6 | |||
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|short_description=p10@NEUROD1 | |short_description=p10@NEUROD1 | ||
}} | }} |
Latest revision as of 21:22, 18 September 2015
Short description: | p10@NEUROD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NEUROD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -404bp_to_AB385071, CU679237, DQ891560, DQ894747_5end |
EntrezGene: | NEUROD1 |
HGNC: | 7762 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 3.81e-21 | 2 |
Ontology term | p-value | n |
---|---|---|
uterine epithelium | 3.81e-21 | 2 |
cervix epithelium | 3.81e-21 | 2 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
uterine cervix | 5.92e-08 | 6 |
neck of organ | 5.92e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
mixed cell type cancer | 6.96e-21 | 2 |
carcinosarcoma | 6.96e-21 | 2 |
lung small cell carcinoma | 3.10e-11 | 4 |
cervical cancer | 2.74e-09 | 5 |
bronchus cancer | 5.70e-07 | 7 |
bronchogenic carcinoma | 5.70e-07 | 7 |