FFCP PHASE1:Hg19::chr8:8244141..8244155,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=157285 | |EntrezGene=157285 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=E5RFL5 | |UniProt=E5RFL5 | ||
|association_with_transcript=-133bp_to_ENST00000520004_5end | |association_with_transcript=-133bp_to_ENST00000520004_5end | ||
|cluster_id=chr8:8244141..8244155,- | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_8_at_SGK223_5end | |description=CAGE_peak_8_at_SGK223_5end | ||
|id=chr8:8244141..8244155,- | |id=chr8:8244141..8244155,- | ||
|ontology_enrichment_celltype=CL:0002322!6.12e-11!5 | |ontology_enrichment_celltype=CL:0002322!6.12e-11!5 | ||
|ontology_enrichment_celltype_v019=CL:0000222;1.81e-40;1!CL:0000632;1.71e-14;3!CL:0000327;1.24e-11;15!CL:0000138;5.54e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,1.83e-14,3;CL:0000327,1.27e-11,15;CL:0000058,5.54e-08,6;CL:0000138,5.54e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.71e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;6.62e-41;1!DOID:4549;6.62e-41;1!DOID:5861;6.62e-41;1!DOID:6496;6.62e-41;1!DOID:201;5.54e-08;6!DOID:0060100;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.62e-41,1;DOID:4549,6.62e-41,1;DOID:5861,6.62e-41,1;DOID:6496,6.62e-41,1;DOID:201,5.54e-08,6;DOID:0060100,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.68e-15!94;UBERON:0001016!2.68e-15!94;UBERON:0005743!1.54e-14!86;UBERON:0001017!2.04e-14!82;UBERON:0000955!3.94e-13!69;UBERON:0006238!3.94e-13!69;UBERON:0001869!5.78e-12!32;UBERON:0002616!1.30e-11!59;UBERON:0002619!3.66e-11!22;UBERON:0000956!4.54e-11!25;UBERON:0000203!4.54e-11!25;UBERON:0001893!4.96e-11!34;UBERON:0001950!2.26e-10!20;UBERON:0002791!3.76e-10!33;UBERON:0002020!9.55e-10!34;UBERON:0003528!9.55e-10!34;UBERON:0001049!1.05e-08!57;UBERON:0005068!1.05e-08!57;UBERON:0006241!1.05e-08!57;UBERON:0007135!1.05e-08!57;UBERON:0003056!1.61e-08!61;UBERON:0002780!1.73e-08!41;UBERON:0001890!1.73e-08!41;UBERON:0006240!1.73e-08!41;UBERON:0003080!3.39e-08!42;UBERON:0000033!5.21e-08!123;UBERON:0004121!6.95e-08!169;UBERON:0000924!1.74e-07!173;UBERON:0006601!1.74e-07!173;UBERON:0003075!1.90e-07!86;UBERON:0007284!1.90e-07!86;UBERON:0000153!2.79e-07!129;UBERON:0007811!2.79e-07!129;UBERON:0002346!7.42e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.22e-14;3!UBERON:0004755;1.22e-14;3!UBERON:0002037;6.55e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.22e-14,3;UBERON:0004755,1.22e-14,3;UBERON:0002037,6.34e-08,6;UBERON:0006215,6.34e-08,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0,0.164201178899891,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0.169560592310488,0,0,0,0.365921118388786,0.795178609928912,0.348581828608555,0.518305275076852,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.99972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0.306923946576125,0,0,0,0,0,0.154209693802656,0.177561725313127,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,1.99613798001194,0.520855522170466,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0.221158519862449,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.73664823494752,0,0,0,0.189932387867636,0,0,0,0,0.144090417154106,0.229073192331831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0.472699093843342,0.247247575143499,0.13480708770837,0,0,0.795229689809303,0,0.160753148465019,0.412618309791701,0,0,0,0.121499113316049,0,0,0.209818352539992,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.340776043570843,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,1.26184898228651,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0.127894371303652,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0.206686796501184,0.19024743058172,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0.131545547125698,0,0,0,0.157115589916002,0.840816489941367,0,0,0,0,0,0,0,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0.252332849670158,0.109265571963696,0.380095503034311,0.305966489225945,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p8@SGK223 | |short_description=p8@SGK223 | ||
}} | }} |
Latest revision as of 06:19, 19 September 2015
Short description: | p8@SGK223 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SGK223_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -133bp_to_ENST00000520004_5end |
EntrezGene: | SGK223 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 1.83e-14 | 3 |
extracellular matrix secreting cell | 1.27e-11 | 15 |
chondroblast | 5.54e-08 | 6 |
chondrocyte | 5.54e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.22e-14 | 3 |
skeletal tissue | 1.22e-14 | 3 |
cerebellum | 6.34e-08 | 6 |
rhombic lip | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.62e-41 | 1 |
extraosseous chondrosarcoma | 6.62e-41 | 1 |
myxoid chondrosarcoma | 6.62e-41 | 1 |
extraskeletal myxoid chondrosarcoma | 6.62e-41 | 1 |
connective tissue cancer | 5.54e-08 | 6 |
musculoskeletal system cancer | 5.54e-08 | 6 |