FFCP PHASE1:Hg19::chr2:225450258..225450269,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8452 | |EntrezGene=8452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2553 | |HGNC=2553 | ||
|TSSclassifier=strong | |||
|UniProt=Q13618 | |UniProt=Q13618 | ||
|association_with_transcript=-148bp_to_ENST00000344951,NM_003590,uc002vny.2,uc010zls.1_5end | |association_with_transcript=-148bp_to_ENST00000344951,NM_003590,uc002vny.2,uc010zls.1_5end | ||
|cluster_id=chr2:225450258..225450269,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_21_at_CUL3_5end | |description=CAGE_peak_21_at_CUL3_5end | ||
|id=chr2:225450258..225450269,- | |id=chr2:225450258..225450269,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.87e-30;3!CL:0002363;2.74e-12;2!CL:0000094;5.08e-12;8!CL:0000081;5.31e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.67e-30,3;CL:0002363,3.62e-12,2;CL:0000008,3.62e-12,2;CL:0000094,4.94e-12,8;CL:0000081,5.20e-09,11 | |||
|ontology_enrichment_development_v019=CL:0000008;2.74e-12;2!UBERON:0009117;6.20e-10;10!UBERON:0005564;6.20e-10;10!UBERON:0005062;8.85e-07;4!UBERON:0007284;8.85e-07;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.55e-21!115;UBERON:0001049!6.91e-17!57;UBERON:0005068!6.91e-17!57;UBERON:0006241!6.91e-17!57;UBERON:0007135!6.91e-17!57;UBERON:0002780!1.56e-15!41;UBERON:0001890!1.56e-15!41;UBERON:0006240!1.56e-15!41;UBERON:0002020!4.28e-15!34;UBERON:0003528!4.28e-15!34;UBERON:0003080!5.59e-15!42;UBERON:0001893!6.13e-15!34;UBERON:0002616!8.39e-15!59;UBERON:0002346!1.54e-14!90;UBERON:0002791!4.56e-14!33;UBERON:0000955!6.27e-14!69;UBERON:0006238!6.27e-14!69;UBERON:0001869!1.85e-13!32;UBERON:0003075!5.20e-13!86;UBERON:0007284!5.20e-13!86;UBERON:0001017!1.45e-12!82;UBERON:0005743!1.91e-12!86;UBERON:0000073!1.06e-11!94;UBERON:0001016!1.06e-11!94;UBERON:0003056!7.99e-11!61;UBERON:0002619!1.99e-10!22;UBERON:0001950!2.38e-10!20;UBERON:0000956!6.19e-10!25;UBERON:0000203!6.19e-10!25;UBERON:0000924!1.39e-09!173;UBERON:0006601!1.39e-09!173;UBERON:0000033!3.22e-09!123;UBERON:0000153!6.05e-09!129;UBERON:0007811!6.05e-09!129;UBERON:0004121!1.62e-08!169;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!2.55e-21!115;UBERON:0001049!6.91e-17!57;UBERON:0005068!6.91e-17!57;UBERON:0006241!6.91e-17!57;UBERON:0007135!6.91e-17!57;UBERON:0002780!1.56e-15!41;UBERON:0001890!1.56e-15!41;UBERON:0006240!1.56e-15!41;UBERON:0002020!4.28e-15!34;UBERON:0003528!4.28e-15!34;UBERON:0003080!5.59e-15!42;UBERON:0001893!6.13e-15!34;UBERON:0002616!8.39e-15!59;UBERON:0002346!1.54e-14!90;UBERON:0002791!4.56e-14!33;UBERON:0000955!6.27e-14!69;UBERON:0006238!6.27e-14!69;UBERON:0001869!1.85e-13!32;UBERON:0003075!5.20e-13!86;UBERON:0007284!5.20e-13!86;UBERON:0001017!1.45e-12!82;UBERON:0005743!1.91e-12!86;UBERON:0000073!1.06e-11!94;UBERON:0001016!1.06e-11!94;UBERON:0003056!7.99e-11!61;UBERON:0002619!1.99e-10!22;UBERON:0001950!2.38e-10!20;UBERON:0000956!6.19e-10!25;UBERON:0000203!6.19e-10!25;UBERON:0000924!1.39e-09!173;UBERON:0006601!1.39e-09!173;UBERON:0000033!3.22e-09!123;UBERON:0000153!6.05e-09!129;UBERON:0007811!6.05e-09!129;UBERON:0004121!1.62e-08!169;UBERON:0002308!6.27e-07!9;UBERON:0000125!6.27e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.67e-23;1!UBERON:0005208;3.67e-23;1!UBERON:0004145;3.67e-23;1!UBERON:0005946;3.67e-23;1!UBERON:0005965;3.67e-23;1!UBERON:0002078;3.67e-23;1!UBERON:0003566;2.74e-12;2!UBERON:0002081;2.74e-12;2!UBERON:0002133;2.74e-12;2!UBERON:0001777;2.74e-12;2!UBERON:0000473;3.54e-12;8!UBERON:0010313;9.65e-10;10!UBERON:0003135;4.08e-09;11!UBERON:0003978;1.26e-08;3!UBERON:0004151;1.26e-08;3!UBERON:0000946;1.26e-08;3!UBERON:0003891;8.85e-07;4!UBERON:0000964;8.85e-07;4!UBERON:0010409;8.85e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.10e-23,1;UBERON:0005208,4.10e-23,1;UBERON:0005946,4.10e-23,1;UBERON:0005965,4.10e-23,1;UBERON:0002078,4.10e-23,1;UBERON:0002081,2.90e-12,2;UBERON:0002133,2.90e-12,2;UBERON:0010227,2.90e-12,2;UBERON:0000473,3.54e-12,8;UBERON:0003566,3.62e-12,2;UBERON:0001777,3.62e-12,2;UBERON:0010313,1.10e-09,10;UBERON:0002342,1.10e-09,10;UBERON:0005062,1.10e-09,10;UBERON:0003135,4.08e-09,11;UBERON:0003978,1.30e-08,3;UBERON:0009751,1.30e-08,3;UBERON:0004151,1.30e-08,3;UBERON:0000946,1.30e-08,3;UBERON:0002523,1.30e-08,3;UBERON:0005983,1.30e-08,3;UBERON:0004145,1.30e-08,3;UBERON:0002165,1.30e-08,3;UBERON:0002062,1.30e-08,3;UBERON:0007280,1.30e-08,3 | |||
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|short_description=p21@CUL3 | |short_description=p21@CUL3 | ||
}} | }} |
Latest revision as of 01:42, 25 September 2015
Short description: | p21@CUL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_CUL3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -148bp_to_ENST00000344951, NM_003590, uc002vny.2, uc010zls.1_5end |
EntrezGene: | CUL3 |
HGNC: | 2553 |
UniProt: | Q13618 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.67e-30 | 3 |
keratocyte | 3.62e-12 | 2 |
migratory cranial neural crest cell | 3.62e-12 | 2 |
granulocyte | 4.94e-12 | 8 |
blood cell | 5.20e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.10e-23 | 1 |
right atrium valve | 4.10e-23 | 1 |
outflow tract of atrium | 4.10e-23 | 1 |
outflow part of right atrium | 4.10e-23 | 1 |
right cardiac atrium | 4.10e-23 | 1 |
cardiac atrium | 2.90e-12 | 2 |
atrioventricular valve | 2.90e-12 | 2 |
future cardiac atrium | 2.90e-12 | 2 |
testis | 3.54e-12 | 8 |
head connective tissue | 3.62e-12 | 2 |
substantia propria of cornea | 3.62e-12 | 2 |
neural crest-derived structure | 1.10e-09 | 10 |
neural crest | 1.10e-09 | 10 |
neural fold | 1.10e-09 | 10 |
male reproductive organ | 4.08e-09 | 11 |
valve | 1.30e-08 | 3 |
cardiac mesenchyme | 1.30e-08 | 3 |
cardiac chamber | 1.30e-08 | 3 |
cardial valve | 1.30e-08 | 3 |
tunica intima | 1.30e-08 | 3 |
heart layer | 1.30e-08 | 3 |
outflow tract | 1.30e-08 | 3 |
endocardium | 1.30e-08 | 3 |
endocardial cushion | 1.30e-08 | 3 |
presumptive endocardium | 1.30e-08 | 3 |