FFCP PHASE1:Hg19::chr14:38064572..38064584,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:38064572..38064584,-
|short_description=p5@FOXA1
|description=CAGE_peak_5_at_FOXA1_5end
|association_with_transcript=-83bp_to_NM_004496,uc001wuf.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3169 | |EntrezGene=3169 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5021 | |HGNC=5021 | ||
|TSSclassifier=strong | |||
|UniProt=P55317 | |UniProt=P55317 | ||
|association_with_transcript=-83bp_to_NM_004496,uc001wuf.2_5end | |||
|cluster_id=chr14:38064572..38064584,- | |||
|coexpression_cluster_id=C885 | |||
|description=CAGE_peak_5_at_FOXA1_5end | |||
|id=chr14:38064572..38064584,- | |||
|ontology_enrichment_celltype=CL:0000066!6.79e-24!254;CL:0000223!2.00e-14!59;CL:0000181!8.59e-09!12;CL:0000417!8.59e-09!12;CL:0000668!8.59e-09!12;CL:0000414!8.59e-09!12;CL:0000412!8.59e-09!12;CL:0000182!8.59e-09!12;CL:0002076!2.00e-08!43;CL:0002231!8.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.20e-19;12!CL:0002563;1.47e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.31e-19,12;CL:0002563,1.27e-10,4;CL:0000223,1.46e-09,58;CL:0000066,1.77e-09,253 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.60e-13;3!UBERON:0003353;1.60e-13;3!UBERON:0009497;8.02e-12;13!UBERON:0008425;2.53e-11;1!UBERON:0004161;2.85e-08;11!UBERON:0001041;9.84e-08;30!UBERON:0003104;1.76e-07;31 | |||
|ontology_enrichment_disease=DOID:305!1.54e-41!106;DOID:0050687!3.37e-32!143;DOID:162!2.66e-19!235;DOID:14566!1.49e-18!239;DOID:7!1.17e-10!39;DOID:5093!1.97e-10!4;DOID:1612!1.97e-10!4;DOID:299!4.23e-08!25;DOID:1749!1.19e-07!14;DOID:0050615!2.57e-07!16;DOID:3119!7.16e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:5093;1.18e-38;4!DOID:1612;1.18e-38;4!DOID:7;9.41e-16;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.36e-39,4;DOID:1612,3.36e-39,4;DOID:7,1.06e-18,39;DOID:305,3.66e-13,106;DOID:0050687,3.27e-09,143 | |||
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|short_description=p5@FOXA1 | |||
}} | }} |
Latest revision as of 23:26, 19 September 2015
Short description: | p5@FOXA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FOXA1_5end |
Coexpression cluster: | C885_breast_Intestinal_MCF7_Prostate_small_colon_Hepatocyte |
Association with transcript: | -83bp_to_NM_004496, uc001wuf.2_5end |
EntrezGene: | FOXA1 |
HGNC: | 5021 |
UniProt: | P55317 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.31e-19 | 12 |
intestinal epithelial cell | 1.27e-10 | 4 |
endodermal cell | 1.46e-09 | 58 |
epithelial cell | 1.77e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.36e-39 | 4 |
breast cancer | 3.36e-39 | 4 |
disease of anatomical entity | 1.06e-18 | 39 |
carcinoma | 3.66e-13 | 106 |
cell type cancer | 3.27e-09 | 143 |