FFCP PHASE1:Hg19::chr2:234580525..234580551,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54600 | |EntrezGene=54600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12541 | |HGNC=12541 | ||
|TSSclassifier=strong | |||
|UniProt=O60656,Q5DSZ5 | |UniProt=O60656,Q5DSZ5 | ||
|association_with_transcript=0bp_to_NM_021027,uc002vus.2,uc010zmw.1_5end | |association_with_transcript=0bp_to_NM_021027,uc002vus.2,uc010zmw.1_5end | ||
|cluster_id=chr2:234580525..234580551,+ | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_UGT1A9_5end | |description=CAGE_peak_1_at_UGT1A9_5end | ||
|id=chr2:234580525..234580551,+ | |id=chr2:234580525..234580551,+ | ||
|ontology_enrichment_celltype=CL:0000159!1.84e-12!2;CL:0000181!2.59e-08!12;CL:0000417!2.59e-08!12;CL:0000668!2.59e-08!12;CL:0000414!2.59e-08!12;CL:0000412!2.59e-08!12;CL:0000182!2.59e-08!12;CL:0000319!4.34e-07!1;CL:0000313!4.89e-07!1;CL:0002563!8.85e-07!4 | |ontology_enrichment_celltype=CL:0000159!1.84e-12!2;CL:0000181!2.59e-08!12;CL:0000417!2.59e-08!12;CL:0000668!2.59e-08!12;CL:0000414!2.59e-08!12;CL:0000412!2.59e-08!12;CL:0000182!2.59e-08!12;CL:0000319!4.34e-07!1;CL:0000313!4.89e-07!1;CL:0002563!8.85e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.47e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.47e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;8.56e-13;10!UBERON:0007687;8.56e-13;10!UBERON:0003104;1.83e-07;31 | |||
|ontology_enrichment_disease=DOID:5662!3.21e-07!1;DOID:3030!4.34e-07!1;DOID:2152!4.89e-07!1 | |ontology_enrichment_disease=DOID:5662!3.21e-07!1;DOID:3030!4.34e-07!1;DOID:2152!4.89e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.27e-11!55;UBERON:0005173!3.27e-11!55;UBERON:0003929!3.80e-11!54;UBERON:0005057!2.13e-10!26;UBERON:0002417!6.59e-10!61;UBERON:0000916!6.59e-10!61;UBERON:0009497!3.68e-08!25;UBERON:0000015!3.68e-08!25;UBERON:0002423!3.68e-08!25;UBERON:0006235!3.68e-08!25;UBERON:0004161!3.68e-08!25;UBERON:0005911!5.06e-08!82;UBERON:0002107!7.06e-08!19;UBERON:0006925!7.06e-08!19;UBERON:0008836!7.06e-08!19;UBERON:0002368!1.69e-07!35;UBERON:0004911!4.89e-07!1;UBERON:0001242!8.85e-07!4;UBERON:0001262!8.85e-07!4;UBERON:0004786!8.85e-07!4;UBERON:0004808!8.85e-07!4;UBERON:0001277!8.85e-07!4;UBERON:0008835!9.17e-07!22;UBERON:0003894!9.17e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.71e-11;19!UBERON:0006925;1.71e-11;19!UBERON:0005172;4.62e-09;52!UBERON:0005173;4.62e-09;52!UBERON:0002423;8.60e-09;25!UBERON:0002365;2.33e-07;31!UBERON:0002330;2.33e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.28e-11,54;UBERON:0005173,1.28e-11,54;UBERON:0002107,1.71e-11,19;UBERON:0006925,1.71e-11,19;UBERON:0008836,1.71e-11,19;UBERON:0002417,2.12e-10,60;UBERON:0000916,2.12e-10,60;UBERON:0008835,5.84e-10,22;UBERON:0003894,5.84e-10,22;UBERON:0009854,1.55e-09,23;UBERON:0007499,8.60e-09,25;UBERON:0009497,8.60e-09,25;UBERON:0000015,8.60e-09,25;UBERON:0002423,8.60e-09,25;UBERON:0006235,8.60e-09,25;UBERON:0004161,8.60e-09,25;UBERON:0009856,1.84e-08,26;UBERON:0002365,3.96e-07,31;UBERON:0002330,3.96e-07,31 | |||
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|short_description=p1@UGT1A9 | |short_description=p1@UGT1A9 | ||
}} | }} |
Latest revision as of 23:24, 15 September 2015
Short description: | p1@UGT1A9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_UGT1A9_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_NM_021027, uc002vus.2, uc010zmw.1_5end |
EntrezGene: | UGT1A9 |
HGNC: | 12541 |
UniProt: | O60656Q5DSZ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.47e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.28e-11 | 54 |
abdominal segment element | 1.28e-11 | 54 |
liver | 1.71e-11 | 19 |
digestive gland | 1.71e-11 | 19 |
liver bud | 1.71e-11 | 19 |
abdominal segment of trunk | 2.12e-10 | 60 |
abdomen | 2.12e-10 | 60 |
hepatic diverticulum | 5.84e-10 | 22 |
liver primordium | 5.84e-10 | 22 |
digestive tract diverticulum | 1.55e-09 | 23 |
epithelial sac | 8.60e-09 | 25 |
epithelium of foregut-midgut junction | 8.60e-09 | 25 |
anatomical boundary | 8.60e-09 | 25 |
hepatobiliary system | 8.60e-09 | 25 |
foregut-midgut junction | 8.60e-09 | 25 |
septum transversum | 8.60e-09 | 25 |
sac | 1.84e-08 | 26 |
exocrine gland | 3.96e-07 | 31 |
exocrine system | 3.96e-07 | 31 |