FFCP PHASE1:Hg19::chr9:706306..706335,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:706306..706335,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_at_chr9:706306..706335,+ | |description=CAGE_peak_at_chr9:706306..706335,+ | ||
|id=chr9:706306..706335,+ | |id=chr9:706306..706335,+ | ||
|ontology_enrichment_celltype=CL:0000181!7.74e-14!12;CL:0000417!7.74e-14!12;CL:0000668!7.74e-14!12;CL:0000414!7.74e-14!12;CL:0000412!7.74e-14!12;CL:0000182!7.74e-14!12;CL:0002563!1.19e-07!4 | |ontology_enrichment_celltype=CL:0000181!7.74e-14!12;CL:0000417!7.74e-14!12;CL:0000668!7.74e-14!12;CL:0000414!7.74e-14!12;CL:0000412!7.74e-14!12;CL:0000182!7.74e-14!12;CL:0002563!1.19e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.81e-30;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.81e-30,12;CL:0000223,5.78e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;8.62e-58;11!UBERON:0009497;4.63e-49;13!UBERON:0001041;8.79e-22;30!UBERON:0003104;7.12e-21;31 | |||
|ontology_enrichment_disease=DOID:7!1.79e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.96e-21;2!DOID:7;1.99e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,6.96e-21,2;DOID:7,5.37e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0005172!1.76e-17!55;UBERON:0005173!1.76e-17!55;UBERON:0009497!6.62e-16!25;UBERON:0000015!6.62e-16!25;UBERON:0002423!6.62e-16!25;UBERON:0006235!6.62e-16!25;UBERON:0004161!6.62e-16!25;UBERON:0002417!1.63e-15!61;UBERON:0000916!1.63e-15!61;UBERON:0003929!2.62e-15!54;UBERON:0008835!3.99e-14!22;UBERON:0003894!3.99e-14!22;UBERON:0009854!1.79e-13!23;UBERON:0007499!2.51e-12!25;UBERON:0002107!3.00e-12!19;UBERON:0006925!3.00e-12!19;UBERON:0008836!3.00e-12!19;UBERON:0009856!8.10e-12!26;UBERON:0005911!2.62e-09!82;UBERON:0005177!3.39e-09!107;UBERON:0005057!8.48e-09!26;UBERON:0002368!1.63e-08!35;UBERON:0000949!2.32e-08!45;UBERON:0000989!6.10e-08!1;UBERON:0008811!6.10e-08!1;UBERON:0006258!6.10e-08!1;UBERON:0005876!6.10e-08!1;UBERON:0004874!6.10e-08!1;UBERON:0001242!1.19e-07!4;UBERON:0001262!1.19e-07!4;UBERON:0004786!1.19e-07!4;UBERON:0004808!1.19e-07!4;UBERON:0001277!1.19e-07!4;UBERON:0002530!1.30e-07!59;UBERON:0001301!1.35e-07!1;UBERON:0002365!2.76e-07!31;UBERON:0002330!2.76e-07!31;UBERON:0009569!3.07e-07!113;UBERON:0002100!5.02e-07!216;UBERON:0003104!6.52e-07!238;UBERON:0009142!6.52e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;7.04e-34;19!UBERON:0006925;7.04e-34;19!UBERON:0002423;5.75e-26;25!UBERON:0002365;5.70e-20;31!UBERON:0002330;5.70e-20;31!UBERON:0002368;1.04e-15;33!UBERON:0000949;1.63e-13;43!UBERON:0005172;1.88e-07;52!UBERON:0005173;1.88e-07;52!UBERON:0002530;8.18e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.04e-34,19;UBERON:0006925,7.04e-34,19;UBERON:0008836,7.04e-34,19;UBERON:0008835,2.19e-29,22;UBERON:0003894,2.19e-29,22;UBERON:0009854,3.80e-28,23;UBERON:0007499,5.75e-26,25;UBERON:0009497,5.75e-26,25;UBERON:0000015,5.75e-26,25;UBERON:0002423,5.75e-26,25;UBERON:0006235,5.75e-26,25;UBERON:0004161,5.75e-26,25;UBERON:0009856,5.31e-25,26;UBERON:0002365,4.17e-21,31;UBERON:0002330,4.17e-21,31;UBERON:0002368,8.68e-19,35;UBERON:0000949,8.74e-15,45;UBERON:0003929,1.93e-12,54;UBERON:0005172,1.93e-12,54;UBERON:0005173,1.93e-12,54;UBERON:0002530,1.91e-11,59;UBERON:0002417,2.88e-11,60;UBERON:0000916,2.88e-11,60;UBERON:0005911,2.05e-08,82;UBERON:0001041,5.76e-08,87;UBERON:0005177,6.11e-07,101 | |||
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|short_description=p@chr9:706306..706335,+ | |short_description=p@chr9:706306..706335,+ | ||
}} | }} |
Latest revision as of 02:22, 1 August 2015
Short description: | p@chr9:706306..706335, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:706306..706335, + |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.81e-30 | 12 |
endodermal cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 7.04e-34 | 19 |
digestive gland | 7.04e-34 | 19 |
liver bud | 7.04e-34 | 19 |
hepatic diverticulum | 2.19e-29 | 22 |
liver primordium | 2.19e-29 | 22 |
digestive tract diverticulum | 3.80e-28 | 23 |
epithelial sac | 5.75e-26 | 25 |
epithelium of foregut-midgut junction | 5.75e-26 | 25 |
anatomical boundary | 5.75e-26 | 25 |
hepatobiliary system | 5.75e-26 | 25 |
foregut-midgut junction | 5.75e-26 | 25 |
septum transversum | 5.75e-26 | 25 |
sac | 5.31e-25 | 26 |
exocrine gland | 4.17e-21 | 31 |
exocrine system | 4.17e-21 | 31 |
endocrine gland | 8.68e-19 | 35 |
endocrine system | 8.74e-15 | 45 |
gut epithelium | 1.93e-12 | 54 |
abdomen element | 1.93e-12 | 54 |
abdominal segment element | 1.93e-12 | 54 |
gland | 1.91e-11 | 59 |
abdominal segment of trunk | 2.88e-11 | 60 |
abdomen | 2.88e-11 | 60 |
endo-epithelium | 2.05e-08 | 82 |
foregut | 5.76e-08 | 87 |
trunk region element | 6.11e-07 | 101 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 6.96e-21 | 2 |
disease of anatomical entity | 5.37e-10 | 39 |