FFCP PHASE1:Hg19::chr9:73480470..73480475,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80036 | |EntrezGene=80036 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17992 | |HGNC=17992 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-85bp_to_ENST00000437699_5end | |association_with_transcript=-85bp_to_ENST00000437699_5end | ||
|cluster_id=chr9:73480470..73480475,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_23_at_TRPM3_5end | |description=CAGE_peak_23_at_TRPM3_5end | ||
|id=chr9:73480470..73480475,- | |id=chr9:73480470..73480475,- | ||
|ontology_enrichment_celltype=CL:0002586!5.54e-08!3 | |ontology_enrichment_celltype=CL:0002586!5.54e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.39e-66;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001896!9.99e-60!3;UBERON:0005290!9.99e-60!3;UBERON:0010096!9.99e-60!3;UBERON:0002298!5.97e-23!8;UBERON:0002336!7.72e-21!1;UBERON:0001018!7.72e-21!1;UBERON:0002473!7.72e-21!1;UBERON:0005340!7.72e-21!1;UBERON:0002316!7.72e-21!1;UBERON:0003544!7.72e-21!1;UBERON:0001020!7.72e-21!1;UBERON:0005970!7.72e-21!1;UBERON:0002437!7.72e-21!1;UBERON:0000966!4.64e-17!5;UBERON:0005388!4.64e-17!5;UBERON:0001802!4.64e-17!5;UBERON:0004733!1.50e-15!12;UBERON:0002028!1.50e-15!12;UBERON:0007277!1.50e-15!12;UBERON:0004732!2.08e-14!13;UBERON:0003076!1.41e-12!15;UBERON:0003057!1.41e-12!15;UBERON:0005162!4.09e-11!2;UBERON:0000122!4.09e-11!2;UBERON:0003075!5.84e-11!86;UBERON:0007284!5.84e-11!86;UBERON:0005743!7.36e-11!86;UBERON:0002346!1.82e-10!90;UBERON:0000019!4.04e-10!19;UBERON:0000047!4.04e-10!19;UBERON:0004088!4.04e-10!19;UBERON:0003072!4.04e-10!19;UBERON:0003071!4.04e-10!19;UBERON:0004128!4.04e-10!19;UBERON:0000033!7.89e-10!123;UBERON:0000073!7.94e-10!94;UBERON:0001016!7.94e-10!94;UBERON:0000970!1.21e-09!20;UBERON:0000153!2.33e-09!129;UBERON:0007811!2.33e-09!129;UBERON:0002104!3.26e-09!21;UBERON:0001456!3.26e-09!21;UBERON:0000020!1.83e-08!23;UBERON:0007625!3.50e-08!11;UBERON:0001032!3.91e-08!24;UBERON:0004456!3.91e-08!24;UBERON:0001781!5.54e-08!3;UBERON:0001782!5.54e-08!3;UBERON:0005424!5.54e-08!3;UBERON:0000063!2.66e-07!97;UBERON:0000955!4.26e-07!69;UBERON:0006238!4.26e-07!69;UBERON:0004121!5.13e-07!169;UBERON:0000924!7.61e-07!173;UBERON:0006601!7.61e-07!173;UBERON:0005085!7.93e-07!29 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;1.48e-40;5!UBERON:0005388;1.48e-40;5!UBERON:0001802;1.48e-40;5!UBERON:0000019;6.95e-12;19!UBERON:0000047;6.95e-12;19!UBERON:0004088;6.95e-12;19!UBERON:0010230;6.95e-12;19!UBERON:0000970;2.29e-11;20!UBERON:0002104;6.74e-11;21!UBERON:0001456;6.74e-11;21!UBERON:0000020;4.42e-10;23!UBERON:0001032;1.01e-09;24!UBERON:0004456;1.01e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000966,4.27e-34,6;UBERON:0005388,4.27e-34,6;UBERON:0001802,4.27e-34,6;UBERON:0000019,2.29e-11,20;UBERON:0000047,2.29e-11,20;UBERON:0010312,2.29e-11,20;UBERON:0004088,2.29e-11,20;UBERON:0010230,2.29e-11,20;UBERON:0003072,2.29e-11,20;UBERON:0004128,2.29e-11,20;UBERON:0003071,2.29e-11,20;UBERON:0000970,6.74e-11,21;UBERON:0002104,6.74e-11,21;UBERON:0001456,1.80e-10,22;UBERON:0000020,1.01e-09,24;UBERON:0001032,1.01e-09,24;UBERON:0004456,1.01e-09,24;UBERON:0005085,7.41e-08,31 | |||
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|short_description=p23@TRPM3 | |short_description=p23@TRPM3 | ||
}} | }} |
Latest revision as of 18:43, 17 September 2015
Short description: | p23@TRPM3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_TRPM3_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -85bp_to_ENST00000437699_5end |
EntrezGene: | TRPM3 |
HGNC: | 17992 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retina | 4.27e-34 | 6 |
photoreceptor array | 4.27e-34 | 6 |
posterior segment of eyeball | 4.27e-34 | 6 |
camera-type eye | 2.29e-11 | 20 |
simple eye | 2.29e-11 | 20 |
immature eye | 2.29e-11 | 20 |
ocular region | 2.29e-11 | 20 |
eyeball of camera-type eye | 2.29e-11 | 20 |
optic cup | 2.29e-11 | 20 |
optic vesicle | 2.29e-11 | 20 |
eye primordium | 2.29e-11 | 20 |
eye | 6.74e-11 | 21 |
visual system | 6.74e-11 | 21 |
face | 1.80e-10 | 22 |
sense organ | 1.01e-09 | 24 |
sensory system | 1.01e-09 | 24 |
entire sense organ system | 1.01e-09 | 24 |
ectodermal placode | 7.41e-08 | 31 |