FFCP PHASE1:Hg19::chr2:74210915..74210939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:74210915..74210939,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr2:74210915..74210939,+ | |description=CAGE_peak_at_chr2:74210915..74210939,+ | ||
|id=chr2:74210915..74210939,+ | |id=chr2:74210915..74210939,+ | ||
|ontology_enrichment_celltype=CL:0000223!4.06e-08!59;CL:0000066!1.82e-07!254;CL:0002076!2.81e-07!43 | |ontology_enrichment_celltype=CL:0000223!4.06e-08!59;CL:0000066!1.82e-07!254;CL:0002076!2.81e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.50e-19;7!CL:0000586;2.50e-19;7!CL:0000167;2.06e-15;1!CL:0000164;2.06e-15;1!CL:0000502;2.06e-15;1!CL:0000172;2.06e-15;1!CL:0000173;2.06e-15;1!CL:0002253;1.50e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.51e-19,7;CL:0000586,2.51e-19,7;CL:0000167,1.54e-15,1;CL:0000164,1.54e-15,1;CL:0000502,1.54e-15,1;CL:0000172,1.54e-15,1;CL:0000173,1.54e-15,1;CL:0002351,1.54e-15,1;CL:0002253,1.50e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002351;2.06e-15;1 | |||
|ontology_enrichment_disease=DOID:305!8.03e-13!106;DOID:0050687!3.48e-10!143;DOID:5093!6.08e-08!4;DOID:1612!6.08e-08!4;DOID:299!1.62e-07!25;DOID:1749!4.25e-07!14 | |ontology_enrichment_disease=DOID:305!8.03e-13!106;DOID:0050687!3.48e-10!143;DOID:5093!6.08e-08!4;DOID:1612!6.08e-08!4;DOID:299!1.62e-07!25;DOID:1749!4.25e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:1799;9.98e-16;1!DOID:10165;9.98e-16;1!DOID:1798;9.98e-16;1!DOID:4430;2.06e-15;1!DOID:3095;8.61e-11;22!DOID:2994;8.61e-11;22!DOID:299;2.36e-09;25 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,9.99e-16,1;DOID:10165,9.99e-16,1;DOID:1798,9.99e-16,1;DOID:4430,1.54e-15,1;DOID:3095,8.18e-11,22;DOID:2994,8.18e-11,22;DOID:299,2.53e-09,25;DOID:0050687,6.05e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.72e-09!169;UBERON:0000925!3.72e-09!169;UBERON:0006595!3.72e-09!169;UBERON:0001007!1.40e-08!155;UBERON:0001555!1.40e-08!155;UBERON:0007026!1.40e-08!155;UBERON:0000344!2.19e-07!12;UBERON:0001004!5.95e-07!72;UBERON:0004921!6.92e-07!129;UBERON:0004185!6.92e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001000;2.06e-15;1!UBERON:0005352;2.06e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.75e-15,1;UBERON:0005352,2.75e-15,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,1.30213880542617,0.962059999958153,0,0.341380344856499,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,10.1448117930746,8.43721857451858,5.86695808378844,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0.816164040795739,3.1097675715467,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,1.18375320854817,0,0.30607276163049,0,0,0,0,0,0,0,0,0,1.04135843001079,0.195984794828755,0.261177619741208,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.494495150286999,0.26961417541674,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0.490696182767533,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.196295437002051,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0.781514011233092,2.61906694481422,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.894843454382338,0.196300467230486,0,0,0,0,0,0.701818390386317,0.198950775161368,0,1.6941912305844,0,0.905777061400041,0.0771741581079447,0,0.470317296361523,0,1.64973582971138,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.488419611665847,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,1.39560233594486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.157421562627358,0,0,0.154816123316076,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0.336985893439485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0.397589304964456,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69203229428271,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,1.01950509218015,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.638063562472921,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0,0,0.422250816255987,0,0,0,0,0,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,1.30213880542617,0.962059999958153,0,0.341380344856499,0,0.945550727071745,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,10.1448117930746,8.43721857451858,5.86695808378844,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0.158936578980379,0,0.816164040795739,3.1097675715467,0,0.995261931078505,0.442287822516696,0,0,0,0,0,0,0,0,0.586993856796269,0.242780379534093,1.18375320854817,0,0.30607276163049,0,0,0,0,0,0,0,0,0,1.04135843001079,0.195984794828755,0.261177619741208,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,1.44090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0.494495150286999,0.26961417541674,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.0788057072991982,0.314727528809989,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0.243585196761792,0,0,0,0,0,0.785270481251171,0,0,0,0,0.110929051536852,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.398594520940089,0.490696182767533,0,0,0.633936370075881,0,0,0.172214979660816,0,0,0.139879507719444,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,0,0.196295437002051,0.235939446695481,0,0.231051332300676,0,0,0,0,0,0.781514011233092,2.61906694481422,0,0.591424344868181,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0.894843454382338,0.196300467230486,0,0,0,0,0,0.701818390386317,0.198950775161368,0,1.6941912305844,0,0.905777061400041,0.0771741581079447,0,0.470317296361523,0,1.64973582971138,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0.103432995861895,0.213233981900981,0.23806443146374,0,0,0,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.0673520530145875,0.143444410785353,0,0.488419611665847,0,0,0,0,0.244482888365733,0,0,0,0.320568492303233 | ||
|short_description=p@chr2:74210915..74210939,+ | |short_description=p@chr2:74210915..74210939,+ | ||
}} | }} |
Latest revision as of 12:13, 29 July 2015
Short description: | p@chr2:74210915..74210939, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:74210915..74210939, + |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.51e-19 | 7 |
germ cell | 2.51e-19 | 7 |
peptide hormone secreting cell | 1.54e-15 | 1 |
enteroendocrine cell | 1.54e-15 | 1 |
type D enteroendocrine cell | 1.54e-15 | 1 |
somatostatin secreting cell | 1.54e-15 | 1 |
pancreatic D cell | 1.54e-15 | 1 |
progenitor cell of endocrine pancreas | 1.54e-15 | 1 |
epithelial cell of large intestine | 1.50e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.75e-15 | 1 |
spermatic cord | 2.75e-15 | 1 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 9.99e-16 | 1 |
endocrine pancreas cancer | 9.99e-16 | 1 |
pancreatic endocrine carcinoma | 9.99e-16 | 1 |
somatostatinoma | 1.54e-15 | 1 |
germ cell and embryonal cancer | 8.18e-11 | 22 |
germ cell cancer | 8.18e-11 | 22 |
adenocarcinoma | 2.53e-09 | 25 |
cell type cancer | 6.05e-09 | 143 |