FFCP PHASE1:Hg19::chr2:78667889..78667891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:78667889..78667891,- | |||
|coexpression_cluster_id=C1914 | |||
|description=CAGE_peak_at_chr2:78667889..78667891,- | |description=CAGE_peak_at_chr2:78667889..78667891,- | ||
|id=chr2:78667889..78667891,- | |id=chr2:78667889..78667891,- | ||
|ontology_enrichment_celltype=CL:0002322!2.32e-09!5;CL:0000039!8.59e-08!7;CL:0000586!8.59e-08!7;CL:0000066!4.45e-07!254 | |ontology_enrichment_celltype=CL:0002322!2.32e-09!5;CL:0000039!8.59e-08!7;CL:0000586!8.59e-08!7;CL:0000066!4.45e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000159;9.75e-14;2!CL:0000182;5.97e-09;12!CL:0000039;9.31e-09;7!CL:0000586;9.31e-09;7!CL:0002553;1.04e-07;1!CL:0000319;1.04e-07;1!CL:0000313;1.04e-07;1!CL:0002563;1.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000159,2.12e-13,2;CL:0000066,3.52e-10,253;CL:0000223,1.15e-09,58;CL:0000182,5.86e-09,12;CL:0000039,8.61e-09,7;CL:0000586,8.61e-09,7;CL:0002553,9.72e-08,1;CL:0000319,1.35e-07,1;CL:0002563,1.44e-07,4;CL:0000313,1.75e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.11e-10;10!UBERON:0005564;2.11e-10;10!UBERON:0004161;9.38e-10;11!UBERON:0009497;2.87e-08;13 | |||
|ontology_enrichment_disease=DOID:305!2.15e-24!106;DOID:14566!2.36e-24!239;DOID:162!3.40e-23!235;DOID:0050687!1.87e-21!143;DOID:0050686!4.79e-07!137 | |ontology_enrichment_disease=DOID:305!2.15e-24!106;DOID:14566!2.36e-24!239;DOID:162!3.40e-23!235;DOID:0050687!1.87e-21!143;DOID:0050686!4.79e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:3493;3.31e-14;2!DOID:305;4.17e-10;106!DOID:299;7.42e-09;25!DOID:1799;2.79e-08;1!DOID:10165;2.79e-08;1!DOID:1798;2.79e-08;1!DOID:0050619;4.50e-08;1!DOID:3151;4.50e-08;1!DOID:1357;4.50e-08;1!DOID:3149;4.50e-08;1!DOID:2152;1.04e-07;1!DOID:3030;1.04e-07;1!DOID:12603;1.04e-07;1!DOID:5662;1.04e-07;1!DOID:3119;1.47e-07;14!DOID:3095;3.49e-07;22!DOID:2994;3.49e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.58e-25,106;DOID:0050687,1.69e-21,143;DOID:162,1.45e-16,235;DOID:14566,4.08e-16,239;DOID:3493,1.89e-14,2;DOID:299,6.72e-09,25;DOID:1799,2.70e-08,1;DOID:10165,2.70e-08,1;DOID:1798,2.70e-08,1;DOID:0050619,4.35e-08,1;DOID:1357,4.35e-08,1;DOID:3151,4.99e-08,1;DOID:3149,4.99e-08,1;DOID:3119,1.05e-07,14;DOID:5662,1.26e-07,1;DOID:3030,1.35e-07,1;DOID:2152,1.75e-07,1;DOID:12603,1.87e-07,1;DOID:3095,3.43e-07,22;DOID:2994,3.43e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.99e-09!8 | |ontology_enrichment_uberon=UBERON:0000473!2.99e-09!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001764;4.50e-08;1!UBERON:0001825;4.50e-08;1!UBERON:0000473;1.01e-07;8!UBERON:0004911;1.04e-07;1!UBERON:0001242;1.78e-07;4!UBERON:0001262;1.78e-07;4!UBERON:0004786;1.78e-07;4!UBERON:0004808;1.78e-07;4!UBERON:0001277;1.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,4.35e-08,1;UBERON:0001825,4.35e-08,1;UBERON:0000473,9.48e-08,8;UBERON:0001242,1.44e-07,4;UBERON:0001262,1.44e-07,4;UBERON:0004786,1.44e-07,4;UBERON:0004808,1.44e-07,4;UBERON:0001277,1.44e-07,4;UBERON:0004911,1.75e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.762569244632931,0.278847488557207,0,0.341826167541004,0,0.269272933229316,0,0,0,0,0,0,0,0.225595660617181,0.588187602953219,0.503464760927528,0,0,0,1.95879369790977,2.96841450011276,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0.51595809741485,0.290268993867255,0.292357268344742,0.410577285266046,0,0,0,0.548167698587004,0.397429223405979,0,3.91102765469606,0.881747022766871,0,0.39961921916426,0,0,1.54435498075768,0,0,0,0.815425236441684,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,1.64831716762333,3.97680908739691,0.393709926058995,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,2.35581144375351,0,0,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,4.7143205006656,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0.354581522651905,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,1.62737995515375,0,0,0,0,0,0,0.236664001461131,0.681707238073262,0,0,0,0,1.11855431797792,1.96300467230486,3.41370189950354,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,1.88126918544609,0,0,0,0,0,0,0,0,0.499705779624645,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,1.52971800749174,4.18105053337742,1.22386595690378,1.60330443159336,0.827054095813604,1.75495277504663,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.393553906568396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.132529768321485,0.116193942869518,0.310983165046111,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,1.72183813960359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,3.98836183652353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,1.11481905075431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.762569244632931,0.278847488557207,0,0.341826167541004,0,0.269272933229316,0,0,0,0,0,0,0,0.225595660617181,0.588187602953219,0.503464760927528,0,0,0,1.95879369790977,2.96841450011276,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0.195984794828755,0.522355239482415,0,0.51595809741485,0.290268993867255,0.292357268344742,0.410577285266046,0,0,0,0.548167698587004,0.397429223405979,0,3.91102765469606,0.881747022766871,0,0.39961921916426,0,0,1.54435498075768,0,0,0,0.815425236441684,1.77824838730966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28471228690949,1.64831716762333,3.97680908739691,0.393709926058995,0,0,0,0,0.550157746388935,0.415440338029185,0,0,0,2.0126081255956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0.171086837884329,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,2.35581144375351,0,0,0.1251909307065,0,0,0,0,0.249960815924213,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2288645437686,0,0,0,0.516644938982447,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,1.47221577751538,0,0,0,0.762764190934334,0,0,0,1.21023041222112,0,4.7143205006656,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37190407549935,0,0,0.354581522651905,0,0,0,0.280272163313789,0,0.431855182437243,0,0,0,1.62737995515375,0,0,0,0,0,0,0.236664001461131,0.681707238073262,0,0,0,0,1.11855431797792,1.96300467230486,3.41370189950354,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,1.88126918544609,0,0,0,0,0,0,0,0,0.499705779624645,1.07132363163395,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,1.52971800749174,4.18105053337742,1.22386595690378,1.60330443159336,0.827054095813604,1.75495277504663,0.0757786982182394,0.535928260312357,0,0,0,0,0,0.0620747142958579,0.560659312903067,0,0,0,0,0,0,0,0.569822880276821,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr2:78667889..78667891,- | |short_description=p@chr2:78667889..78667891,- | ||
}} | }} |
Latest revision as of 12:29, 29 July 2015
Short description: | p@chr2:78667889..78667891, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:78667889..78667891, - |
Coexpression cluster: | C1914_signet_nonsmall_gall_pancreatic_smallcell_hepatocellular_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seromucus secreting cell | 2.12e-13 | 2 |
epithelial cell | 3.52e-10 | 253 |
endodermal cell | 1.15e-09 | 58 |
hepatocyte | 5.86e-09 | 12 |
germ line cell | 8.61e-09 | 7 |
germ cell | 8.61e-09 | 7 |
lung fibroblast | 9.72e-08 | 1 |
mucus secreting cell | 1.35e-07 | 1 |
intestinal epithelial cell | 1.44e-07 | 4 |
serous secreting cell | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 4.35e-08 | 1 |
paranasal sinus | 4.35e-08 | 1 |
testis | 9.48e-08 | 8 |
intestinal mucosa | 1.44e-07 | 4 |
wall of intestine | 1.44e-07 | 4 |
gastrointestinal system mucosa | 1.44e-07 | 4 |
gastrointestinal system epithelium | 1.44e-07 | 4 |
intestinal epithelium | 1.44e-07 | 4 |
epithelium of female gonad | 1.75e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.58e-25 | 106 |
cell type cancer | 1.69e-21 | 143 |
cancer | 1.45e-16 | 235 |
disease of cellular proliferation | 4.08e-16 | 239 |
signet ring cell adenocarcinoma | 1.89e-14 | 2 |
adenocarcinoma | 6.72e-09 | 25 |
islet cell tumor | 2.70e-08 | 1 |
endocrine pancreas cancer | 2.70e-08 | 1 |
pancreatic endocrine carcinoma | 2.70e-08 | 1 |
paranasal sinus cancer | 4.35e-08 | 1 |
maxillary sinus cancer | 4.35e-08 | 1 |
skin squamous cell carcinoma | 4.99e-08 | 1 |
keratoacanthoma | 4.99e-08 | 1 |
gastrointestinal system cancer | 1.05e-07 | 14 |
pleomorphic carcinoma | 1.26e-07 | 1 |
mucinous adenocarcinoma | 1.35e-07 | 1 |
ovary epithelial cancer | 1.75e-07 | 1 |
acute leukemia | 1.87e-07 | 1 |
germ cell and embryonal cancer | 3.43e-07 | 22 |
germ cell cancer | 3.43e-07 | 22 |