FFCP PHASE1:Hg19::chr3:145881443..145881477,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5352 | |EntrezGene=5352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9082 | |HGNC=9082 | ||
|TSSclassifier=strong | |||
|UniProt=C9JXZ0 | |UniProt=C9JXZ0 | ||
|association_with_transcript=-3bp_to_ENST00000469350_5end | |association_with_transcript=-3bp_to_ENST00000469350_5end | ||
|cluster_id=chr3:145881443..145881477,- | |||
|description=CAGE_peak_3_at_PLOD2_5end | |description=CAGE_peak_3_at_PLOD2_5end | ||
|id=chr3:145881443..145881477,- | |id=chr3:145881443..145881477,- | ||
|ontology_enrichment_celltype=CL:0000222!1.41e-17!119;CL:0000055!9.26e-14!180;CL:0000077!5.67e-12!19;CL:0000680!3.25e-11!57;CL:0000056!3.25e-11!57;CL:0000355!3.25e-11!57;CL:0000220!3.64e-11!246;CL:0002321!7.02e-11!248;CL:0000548!1.91e-10!679;CL:0000004!1.91e-10!679;CL:0000255!1.91e-10!679;CL:0000012!3.65e-10!682;CL:0000187!1.01e-09!54;CL:0000057!1.69e-09!75;CL:0000144!2.01e-08!625;CL:0000359!2.07e-08!32;CL:0000183!3.80e-08!59;CL:0000393!7.21e-08!60;CL:0000211!7.21e-08!60;CL:0000213!4.10e-07!57;CL:0000215!4.10e-07!57;CL:0000192!5.02e-07!42;CL:0000514!5.02e-07!42 | |ontology_enrichment_celltype=CL:0000222!1.41e-17!119;CL:0000055!9.26e-14!180;CL:0000077!5.67e-12!19;CL:0000680!3.25e-11!57;CL:0000056!3.25e-11!57;CL:0000355!3.25e-11!57;CL:0000220!3.64e-11!246;CL:0002321!7.02e-11!248;CL:0000548!1.91e-10!679;CL:0000004!1.91e-10!679;CL:0000255!1.91e-10!679;CL:0000012!3.65e-10!682;CL:0000187!1.01e-09!54;CL:0000057!1.69e-09!75;CL:0000144!2.01e-08!625;CL:0000359!2.07e-08!32;CL:0000183!3.80e-08!59;CL:0000393!7.21e-08!60;CL:0000211!7.21e-08!60;CL:0000213!4.10e-07!57;CL:0000215!4.10e-07!57;CL:0000192!5.02e-07!42;CL:0000514!5.02e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0000077;6.01e-23;19!CL:0000135;3.90e-12;3!CL:0000388;3.90e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,3.39e-23,19;CL:0000135,3.00e-12,3;CL:0000388,3.00e-12,3;CL:0000222,1.16e-09,121;CL:0000213,1.66e-08,58;CL:0000215,1.66e-08,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.36e-12!83;UBERON:0002329!2.36e-12!83;UBERON:0003077!2.36e-12!83;UBERON:0003059!2.36e-12!83;UBERON:0007282!2.36e-12!83;UBERON:0009618!2.36e-12!83;UBERON:0007285!2.36e-12!83;UBERON:0000486!5.66e-11!82;UBERON:0005256!2.22e-10!143;UBERON:0001134!8.06e-10!61;UBERON:0002036!8.06e-10!61;UBERON:0003082!8.06e-10!61;UBERON:0002385!3.37e-09!63;UBERON:0001015!3.37e-09!63;UBERON:0000383!3.37e-09!63;UBERON:0004290!4.31e-09!70;UBERON:0000490!3.52e-08!138;UBERON:0002049!5.24e-08!79;UBERON:0007798!5.24e-08!79;UBERON:0001981!1.08e-07!60;UBERON:0007500!1.08e-07!60;UBERON:0004537!1.08e-07!60;UBERON:0006965!1.08e-07!60;UBERON:0000055!1.10e-07!69;UBERON:0001637!1.92e-07!42;UBERON:0003509!1.92e-07!42;UBERON:0004572!1.92e-07!42;UBERON:0004573!4.11e-07!33;UBERON:0004571!4.11e-07!33 | |ontology_enrichment_uberon=UBERON:0000914!2.36e-12!83;UBERON:0002329!2.36e-12!83;UBERON:0003077!2.36e-12!83;UBERON:0003059!2.36e-12!83;UBERON:0007282!2.36e-12!83;UBERON:0009618!2.36e-12!83;UBERON:0007285!2.36e-12!83;UBERON:0000486!5.66e-11!82;UBERON:0005256!2.22e-10!143;UBERON:0001134!8.06e-10!61;UBERON:0002036!8.06e-10!61;UBERON:0003082!8.06e-10!61;UBERON:0002385!3.37e-09!63;UBERON:0001015!3.37e-09!63;UBERON:0000383!3.37e-09!63;UBERON:0004290!4.31e-09!70;UBERON:0000490!3.52e-08!138;UBERON:0002049!5.24e-08!79;UBERON:0007798!5.24e-08!79;UBERON:0001981!1.08e-07!60;UBERON:0007500!1.08e-07!60;UBERON:0004537!1.08e-07!60;UBERON:0006965!1.08e-07!60;UBERON:0000055!1.10e-07!69;UBERON:0001637!1.92e-07!42;UBERON:0003509!1.92e-07!42;UBERON:0004572!1.92e-07!42;UBERON:0004573!4.11e-07!33;UBERON:0004571!4.11e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.90e-12;3!UBERON:0000043;3.90e-12;3!UBERON:0007845;3.90e-12;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.00e-12,3;UBERON:0000043,3.00e-12,3;UBERON:0007845,3.00e-12,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0.535798369704479,0.673588117878509,0.563057402416611,0,0,0,0,0,0,0,0.12663051166458,0.794455084879313,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0.831192346452549,0.438977620880838,0,0.150238058906597,0.453728732640084,0.179389635688862,0,0.211931901159562,0.600182192168805,0,0,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0,0.710019185033229,0.10075209822764,0,0.966304265816484,3.54569956768085,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0.118306800039844,0,0,0.330881918197182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0,0.0925884451585296,0,0,0,0,0,1.01056513432752,0.462985512576611,1.71228737011138,0,0,0,0,0,0.93733833986777,2.35174979478403,5.95455408418023,0.358234090811393,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0.36669142910475,0.904902010304444,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,2.60588947434988,1.06617584622764,1.58390374586686,0.904318131178758,0,1.99945982364114,0,0,0,0.239624855491583,0,0,0.579125226670317,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.271265023699736,0.623912584592421,0.178428988797162,0.157702415033935,0.468565659970853,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.616838775210622,0,0.492762936082855,1.55776328755086,0.232420756919918,0,0.40101294060657,0,0.114814448164607,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0,0.574265537996172,0,1.6068392984416,0.193341436584244,1.07834031980251,0.15350367472613,1.37836572484531,0.966782203814463,1.30515024522806,0.426133137080504,0.178064071293475,0.495854746082934,0.768760269460425,1.78657797492418,0.30347334256665,0,0.94443704049192,0,0.308033580176089,1.06461206063404,0.869932992075073,0.18532421910392,0.286249773483982,0,1.2655176988749,0.571890581771475,0.511795582622668,0,0,0.78494864019923,0.179872457583315,0,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0.974853958525138,0,0,0,1.13008116620243,0.551365343546124,1.99031692572366,1.31535265576129,0,0,0.405820753925408,0,0,0.573645408816206,0.982490410131212,0,0,0.422215270595328,0,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.01422676164922,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,1.13942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,2.64793564700399,1.56966459203613,0,0.569219092059585,0,0,0,0,0,0.343972064943233,0,0,0,0,0,0,0.685209623233754,1.19228767021794,0,0,15.7912875895521,0,0,0,0,0,0.288109595976299,0.745515213392595,2.12124631155116,0.407712618220842,0.209205692624666,1.52997326454483,0,0,0,0,0.429765441419957,0,0.279282401272254,0,0,0,0,0,0,1.08089965062721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0,0.979762080328227,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,1.08803560673895,0,0.306345576763462,0.655745261419609,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0.235265819698172,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.568209015825267,0,0,0,0.151230923763239,0.310874401165561,0.295710299979268,0.63718706865481,0,0.776314784381297,0.829412415681711,1.06336685823198,0,1.6528336989694,0.761610424337591,1.22061219961398,0.727394636810238,1.39633724155235,0.464033759878494,0,0.400027764663154,0,0,1.26184898228651,0.385239660814607,27.6629652873654,0.782982875895635,1.36023555307363,3.47283711485751,0.244736704506468,2.8654214573038,0,5.70138528904638,10.2479704648611,8.68113172219117,3.37884881306145,0,0,3.64631947412859,0,0.389720617678777,0,0,0.982829546539238,1.72041036127604,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,5.84944699240208,0,0,2.78412259767164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40083213212386,0,0,5.31872283977857,0.222462803784138,0,0,0,0,0.647782773655864,1.43325506366115,0,0,0.116241425368125,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0.679708458751268,0,0,0,0,0.35289487171569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| ||
|short_description=p3@PLOD2 | |short_description=p3@PLOD2 | ||
}} | }} |
Latest revision as of 06:29, 25 September 2015
Short description: | p3@PLOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PLOD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000469350_5end |
EntrezGene: | PLOD2 |
HGNC: | 9082 |
UniProt: | C9JXZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 3.39e-23 | 19 |
fibrocyte | 3.00e-12 | 3 |
tendon cell | 3.00e-12 | 3 |
mesodermal cell | 1.16e-09 | 121 |
lining cell | 1.66e-08 | 58 |
barrier cell | 1.66e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.00e-12 | 3 |
tendon | 3.00e-12 | 3 |
regular connective tissue | 3.00e-12 | 3 |