FFCP PHASE1:Hg19::chr3:79817089..79817094,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6091 | |EntrezGene=6091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10249 | |HGNC=10249 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6N7 | |UniProt=Q9Y6N7 | ||
|association_with_transcript=-30bp_to_NM_002941,uc003dqe.2_5end | |association_with_transcript=-30bp_to_NM_002941,uc003dqe.2_5end | ||
|cluster_id=chr3:79817089..79817094,- | |||
|coexpression_cluster_id=C115 | |||
|description=CAGE_peak_27_at_ROBO1_5end | |description=CAGE_peak_27_at_ROBO1_5end | ||
|id=chr3:79817089..79817094,- | |id=chr3:79817089..79817094,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.78e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.78e-29,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p27@ROBO1 | |short_description=p27@ROBO1 | ||
}} | }} |
Latest revision as of 16:50, 19 September 2015
Short description: | p27@ROBO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ROBO1_5end |
Coexpression cluster: | C115_pituitary_Neural_caudate_putamen_amygdala_medulla_hippocampus |
Association with transcript: | -30bp_to_NM_002941, uc003dqe.2_5end |
EntrezGene: | ROBO1 |
HGNC: | 10249 |
UniProt: | Q9Y6N7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.78e-29 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.51e-57 | 2 |
gland of diencephalon | 2.06e-29 | 4 |
neuroendocrine gland | 2.06e-29 | 4 |
diencephalon | 2.67e-17 | 7 |
future diencephalon | 2.67e-17 | 7 |
regional part of forebrain | 2.46e-11 | 41 |
forebrain | 2.46e-11 | 41 |
anterior neural tube | 2.46e-11 | 41 |
future forebrain | 2.46e-11 | 41 |
duodenum | 9.90e-11 | 2 |
regional part of nervous system | 6.41e-09 | 53 |
regional part of brain | 6.41e-09 | 53 |
neural tube | 1.79e-08 | 56 |
neural rod | 1.79e-08 | 56 |
future spinal cord | 1.79e-08 | 56 |
neural keel | 1.79e-08 | 56 |
pre-chordal neural plate | 8.01e-08 | 61 |
parietal lobe | 5.08e-07 | 5 |
brain | 5.66e-07 | 68 |
future brain | 5.66e-07 | 68 |
small intestine | 6.04e-07 | 4 |
occipital lobe | 6.39e-07 | 5 |