FFCP PHASE1:Hg19::chr4:109010390..109010401,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:109010390..109010401,- | |||
|coexpression_cluster_id=C1082 | |||
|description=CAGE_peak_at_chr4:109010390..109010401,- | |description=CAGE_peak_at_chr4:109010390..109010401,- | ||
|id=chr4:109010390..109010401,- | |id=chr4:109010390..109010401,- | ||
|ontology_enrichment_celltype=CL:0000084!1.87e-25!25;CL:0000827!1.87e-25!25;CL:0000791!1.07e-22!18;CL:0000789!1.07e-22!18;CL:0002420!1.07e-22!18;CL:0002419!1.07e-22!18;CL:0000790!1.07e-22!18;CL:0000838!2.87e-19!52;CL:0000542!8.34e-19!53;CL:0000051!8.34e-19!53;CL:0000624!1.15e-13!6;CL:0000625!8.39e-13!11;CL:0000623!8.30e-10!3;CL:0000825!8.30e-10!3;CL:0002087!3.53e-07!119 | |ontology_enrichment_celltype=CL:0000084!1.87e-25!25;CL:0000827!1.87e-25!25;CL:0000791!1.07e-22!18;CL:0000789!1.07e-22!18;CL:0002420!1.07e-22!18;CL:0002419!1.07e-22!18;CL:0000790!1.07e-22!18;CL:0000838!2.87e-19!52;CL:0000542!8.34e-19!53;CL:0000051!8.34e-19!53;CL:0000624!1.15e-13!6;CL:0000625!8.39e-13!11;CL:0000623!8.30e-10!3;CL:0000825!8.30e-10!3;CL:0002087!3.53e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,2.35e-07,25;CL:0000827,2.35e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.87e-08!4;UBERON:0005058!1.87e-08!4;UBERON:0009113!1.87e-08!4;UBERON:0003295!1.87e-08!4;UBERON:0005562!1.87e-08!4;UBERON:0004177!7.91e-08!7 | |ontology_enrichment_uberon=UBERON:0002370!1.87e-08!4;UBERON:0005058!1.87e-08!4;UBERON:0009113!1.87e-08!4;UBERON:0003295!1.87e-08!4;UBERON:0005562!1.87e-08!4;UBERON:0004177!7.91e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;4.66e-21;2!UBERON:0005058;4.66e-21;2!UBERON:0009113;4.66e-21;2!UBERON:0004177;2.97e-09;5!UBERON:0005057;2.97e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.10e-11,4;UBERON:0005058,3.10e-11,4;UBERON:0009113,3.10e-11,4;UBERON:0003295,3.10e-11,4;UBERON:0005562,3.10e-11,4;UBERON:0003351,6.34e-08,6;UBERON:0004177,5.70e-07,7;UBERON:0005057,5.70e-07,7 | |||
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| ||
|short_description=p@chr4:109010390..109010401,- | |short_description=p@chr4:109010390..109010401,- | ||
}} | }} |
Latest revision as of 00:46, 30 July 2015
Short description: | p@chr4:109010390..109010401, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:109010390..109010401, - |
Coexpression cluster: | C1082_acute_CD4_thymus_small_non_chronic_lymphangiectasia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 2.35e-07 | 25 |
pro-T cell | 2.35e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.10e-11 | 4 |
hemolymphoid system gland | 3.10e-11 | 4 |
thymic region | 3.10e-11 | 4 |
pharyngeal gland | 3.10e-11 | 4 |
thymus primordium | 3.10e-11 | 4 |
pharyngeal epithelium | 6.34e-08 | 6 |
hemopoietic organ | 5.70e-07 | 7 |
immune organ | 5.70e-07 | 7 |