FFCP PHASE1:Hg19::chr4:139208173..139208199,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:139208173..139208199,- | |||
|coexpression_cluster_id=C184 | |||
|description=CAGE_peak_at_chr4:139208173..139208199,- | |description=CAGE_peak_at_chr4:139208173..139208199,- | ||
|id=chr4:139208173..139208199,- | |id=chr4:139208173..139208199,- | ||
|ontology_enrichment_celltype=CL:0000167!6.62e-41!1;CL:0000164!6.62e-41!1;CL:0000502!6.62e-41!1;CL:0000172!6.62e-41!1;CL:0000173!6.62e-41!1;CL:0002351!6.62e-41!1;CL:0000163!1.35e-18!9;CL:0002274!3.49e-09!5;CL:0000457!3.49e-09!5;CL:0002191!3.49e-09!5;CL:0000097!3.49e-09!5;CL:0000831!3.49e-09!5;CL:0002028!3.49e-09!5 | |ontology_enrichment_celltype=CL:0000167!6.62e-41!1;CL:0000164!6.62e-41!1;CL:0000502!6.62e-41!1;CL:0000172!6.62e-41!1;CL:0000173!6.62e-41!1;CL:0002351!6.62e-41!1;CL:0000163!1.35e-18!9;CL:0002274!3.49e-09!5;CL:0000457!3.49e-09!5;CL:0002191!3.49e-09!5;CL:0000097!3.49e-09!5;CL:0000831!3.49e-09!5;CL:0002028!3.49e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000167;9.37e-99;1!CL:0000164;9.37e-99;1!CL:0000502;9.37e-99;1!CL:0000172;9.37e-99;1!CL:0000173;9.37e-99;1!CL:0000150;2.19e-12;9!CL:0000163;2.19e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,9.37e-99,1;CL:0000164,9.37e-99,1;CL:0000502,9.37e-99,1;CL:0000172,9.37e-99,1;CL:0000173,9.37e-99,1;CL:0002351,9.37e-99,1;CL:0000150,2.19e-12,9;CL:0000163,2.19e-12,9 | |||
|ontology_enrichment_development_v019=CL:0002351;9.37e-99;1!UBERON:0007123;5.15e-21;5 | |||
|ontology_enrichment_disease=DOID:4430!6.62e-41!1;DOID:169!5.54e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;9.37e-99;1!DOID:169;7.67e-18;6!DOID:171;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,9.37e-99,1;DOID:169,7.67e-18,6;DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002135!2.21e-40!1;UBERON:0002360!4.66e-21!2;UBERON:0000094!4.66e-21!2;UBERON:0007645!4.66e-21!2;UBERON:0002133!5.70e-21!2;UBERON:0003978!1.83e-14!3;UBERON:0009751!1.83e-14!3;UBERON:0000946!1.83e-14!3;UBERON:0002523!1.83e-14!3;UBERON:0005983!1.83e-14!3;UBERON:0002165!1.83e-14!3;UBERON:0002062!1.83e-14!3;UBERON:0007280!1.83e-14!3;UBERON:0002342!2.51e-12!14;UBERON:0005062!2.51e-12!14;UBERON:0002046!2.74e-09!5;UBERON:0004117!2.74e-09!5;UBERON:0007689!2.74e-09!5;UBERON:0007123!2.74e-09!5;UBERON:0003091!2.74e-09!5 | |ontology_enrichment_uberon=UBERON:0002135!2.21e-40!1;UBERON:0002360!4.66e-21!2;UBERON:0000094!4.66e-21!2;UBERON:0007645!4.66e-21!2;UBERON:0002133!5.70e-21!2;UBERON:0003978!1.83e-14!3;UBERON:0009751!1.83e-14!3;UBERON:0000946!1.83e-14!3;UBERON:0002523!1.83e-14!3;UBERON:0005983!1.83e-14!3;UBERON:0002165!1.83e-14!3;UBERON:0002062!1.83e-14!3;UBERON:0007280!1.83e-14!3;UBERON:0002342!2.51e-12!14;UBERON:0005062!2.51e-12!14;UBERON:0002046!2.74e-09!5;UBERON:0004117!2.74e-09!5;UBERON:0007689!2.74e-09!5;UBERON:0007123!2.74e-09!5;UBERON:0003091!2.74e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;5.15e-21;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,5.15e-21,5;UBERON:0004117,5.15e-21,5;UBERON:0007689,5.15e-21,5;UBERON:0007123,5.15e-21,5;UBERON:0003091,5.15e-21,5;UBERON:0009722,2.37e-10,11;UBERON:0007690,2.37e-10,11;UBERON:0008814,7.60e-07,18 | |||
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|short_description=p@chr4:139208173..139208199,- | |short_description=p@chr4:139208173..139208199,- | ||
}} | }} |
Latest revision as of 01:41, 30 July 2015
Short description: | p@chr4:139208173..139208199, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:139208173..139208199, - |
Coexpression cluster: | C184_somatostatinoma_smallcell_nonsmall_small_gastrointestinal_pineal_thyroid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 9.37e-99 | 1 |
enteroendocrine cell | 9.37e-99 | 1 |
type D enteroendocrine cell | 9.37e-99 | 1 |
somatostatin secreting cell | 9.37e-99 | 1 |
pancreatic D cell | 9.37e-99 | 1 |
progenitor cell of endocrine pancreas | 9.37e-99 | 1 |
glandular epithelial cell | 2.19e-12 | 9 |
endocrine cell | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 5.15e-21 | 5 |
pharyngeal pouch | 5.15e-21 | 5 |
thyroid diverticulum | 5.15e-21 | 5 |
pharyngeal pouch 2 | 5.15e-21 | 5 |
thyroid primordium | 5.15e-21 | 5 |
entire pharyngeal arch endoderm | 2.37e-10 | 11 |
early pharyngeal endoderm | 2.37e-10 | 11 |
pharyngeal arch system | 7.60e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 9.37e-99 | 1 |
neuroendocrine tumor | 7.67e-18 | 6 |
neuroectodermal tumor | 2.73e-11 | 10 |