FFCP PHASE1:Hg19::chr4:183164566..183164573,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55714 | |EntrezGene=55714 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29944 | |HGNC=29944 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000511685_5end | |association_with_transcript=-8bp_to_ENST00000511685_5end | ||
|cluster_id=chr4:183164566..183164573,+ | |||
|coexpression_cluster_id=C159 | |||
|description=CAGE_peak_14_at_ODZ3_5end | |description=CAGE_peak_14_at_ODZ3_5end | ||
|id=chr4:183164566..183164573,+ | |id=chr4:183164566..183164573,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.00e-18!19;CL:0002541!1.54e-13!3;CL:0002166!1.26e-12!3;CL:0000039!1.23e-09!7;CL:0000586!1.23e-09!7;CL:0002097!1.34e-08!2 | |ontology_enrichment_celltype=CL:0000077!1.00e-18!19;CL:0002541!1.54e-13!3;CL:0002166!1.26e-12!3;CL:0000039!1.23e-09!7;CL:0000586!1.23e-09!7;CL:0002097!1.34e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;3.43e-31;3!CL:0000039;8.75e-14;7!CL:0000586;8.75e-14;7!CL:0000077;2.01e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.01e-31,3;CL:0000039,8.02e-14,7;CL:0000586,8.02e-14,7;CL:0000077,2.13e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;4.44e-11;1!UBERON:0006238;1.00e-08;10 | |||
|ontology_enrichment_disease=DOID:162!1.10e-08!235;DOID:14566!2.32e-08!239;DOID:3093!3.65e-08!11 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.52e-11;1!DOID:10165;1.52e-11;1!DOID:1798;1.52e-11;1!DOID:3093;4.86e-08;11 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.31e-11,1;DOID:10165,1.31e-11,1;DOID:1798,1.31e-11,1;DOID:3093,5.29e-08,11 | |||
|ontology_enrichment_uberon=UBERON:0000476!1.54e-13!3;UBERON:0000920!1.54e-13!3;UBERON:0005631!5.59e-10!14;UBERON:0000158!5.59e-10!14;UBERON:0003124!6.85e-10!7;UBERON:0001708!1.40e-09!4;UBERON:0001704!1.40e-09!4;UBERON:0002394!3.96e-09!4;UBERON:0003928!3.96e-09!4;UBERON:0002294!5.77e-09!7;UBERON:0001173!5.77e-09!7;UBERON:0004912!5.77e-09!7;UBERON:0000478!2.61e-07!24;UBERON:0003350!3.41e-07!5 | |ontology_enrichment_uberon=UBERON:0000476!1.54e-13!3;UBERON:0000920!1.54e-13!3;UBERON:0005631!5.59e-10!14;UBERON:0000158!5.59e-10!14;UBERON:0003124!6.85e-10!7;UBERON:0001708!1.40e-09!4;UBERON:0001704!1.40e-09!4;UBERON:0002394!3.96e-09!4;UBERON:0003928!3.96e-09!4;UBERON:0002294!5.77e-09!7;UBERON:0001173!5.77e-09!7;UBERON:0004912!5.77e-09!7;UBERON:0000478!2.61e-07!24;UBERON:0003350!3.41e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.43e-31;3!UBERON:0000920;3.43e-31;3!UBERON:0001282;4.44e-11;1!UBERON:0009842;4.44e-11;1!UBERON:0003704;4.44e-11;1!UBERON:0001171;4.44e-11;1!UBERON:0001172;4.44e-11;1!UBERON:0005631;8.87e-10;10!UBERON:0000158;8.87e-10;10!UBERON:0000478;6.16e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.01e-31,3;UBERON:0003124,2.83e-23,7;UBERON:0005631,9.05e-12,14;UBERON:0000158,9.05e-12,14;UBERON:0001282,3.28e-11,1;UBERON:0009842,3.28e-11,1;UBERON:0003704,3.28e-11,1;UBERON:0001171,3.28e-11,1;UBERON:0001172,3.28e-11,1;UBERON:0000478,6.21e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,4.87148171776693,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69954085009497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93701494939902,14.0643981676717,2.96200226552248,9.4523213572147,3.19001159731919,4.03029410968194,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721429382263803,0,0,0,2.63434171181606,0,0,0,0,2.03856309110421,1.67364554099733,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.906823702049089,1.15761237161917,0.244736704506468,0.179088841081487,0,1.53498834705095,0,1.92914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92860041722134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,2.24217730651031,0,0.863710364874486,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,4.87148171776693,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69954085009497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,3.27259784006895,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93701494939902,14.0643981676717,2.96200226552248,9.4523213572147,3.19001159731919,4.03029410968194,3.73124343213044,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0.208843899010911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721429382263803,0,0,0,2.63434171181606,0,0,0,0,2.03856309110421,1.67364554099733,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55582032678133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0.214441591374926,0,0.906823702049089,1.15761237161917,0.244736704506468,0.179088841081487,0,1.53498834705095,0,1.92914038270915,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92860041722134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86274977341542,0,0,0,0,0,0,0,0,2.24217730651031,0,0.863710364874486,0,0,0,0.581207126840626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@ODZ3 | |short_description=p14@ODZ3 | ||
}} | }} |
Latest revision as of 23:45, 16 September 2015
Short description: | p14@ODZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ODZ3_5end |
Coexpression cluster: | C159_choriocarcinoma_pancreatic_placenta_chorionic_testicular_bronchioalveolar_seminal |
Association with transcript: | -8bp_to_ENST00000511685_5end |
EntrezGene: | ODZ3 |
HGNC: | 29944 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.01e-31 | 3 |
germ line cell | 8.02e-14 | 7 |
germ cell | 8.02e-14 | 7 |
mesothelial cell | 2.13e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.01e-31 | 3 |
chorion | 2.83e-23 | 7 |
extraembryonic membrane | 9.05e-12 | 14 |
membranous layer | 9.05e-12 | 14 |
intralobular bile duct | 3.28e-11 | 1 |
acinus | 3.28e-11 | 1 |
intrahepatic bile duct | 3.28e-11 | 1 |
portal lobule | 3.28e-11 | 1 |
hepatic acinus | 3.28e-11 | 1 |
extraembryonic structure | 6.21e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.31e-11 | 1 |
endocrine pancreas cancer | 1.31e-11 | 1 |
pancreatic endocrine carcinoma | 1.31e-11 | 1 |
nervous system cancer | 5.29e-08 | 11 |