FFCP PHASE1:Hg19::chr5:1155978..1156004,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:1155978..1156004,- | |||
|description=CAGE_peak_at_chr5:1155978..1156004,- | |description=CAGE_peak_at_chr5:1155978..1156004,- | ||
|id=chr5:1155978..1156004,- | |id=chr5:1155978..1156004,- | ||
|ontology_enrichment_celltype=CL:0000625!2.32e-09!11;CL:0000838!5.63e-07!52;CL:0000623!7.05e-07!3;CL:0000825!7.05e-07!3;CL:0000542!9.25e-07!53;CL:0000051!9.25e-07!53 | |ontology_enrichment_celltype=CL:0000625!2.32e-09!11;CL:0000838!5.63e-07!52;CL:0000623!7.05e-07!3;CL:0000825!7.05e-07!3;CL:0000542!9.25e-07!53;CL:0000051!9.25e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000623;7.52e-16;3!CL:0000236;3.17e-09;13!CL:0002178;7.79e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.99e-16,3;CL:0000825,5.99e-16,3;CL:0000236,1.47e-08,14;CL:0002178,7.79e-08,3;CL:0000838,1.04e-07,52;CL:0000542,1.57e-07,53;CL:0000051,1.57e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!2.50e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:3493;3.16e-11;2!DOID:3119;4.06e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,3.50e-11,2;DOID:3119,3.95e-09,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.27e-13!115;UBERON:0005409!5.03e-07!35 | |ontology_enrichment_uberon=UBERON:0007023!8.27e-13!115;UBERON:0005409!5.03e-07!35 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.08e-11;2!UBERON:0001041;6.13e-09;14!UBERON:0001044;3.57e-08;6!UBERON:0003293;3.57e-08;6!UBERON:0003294;3.57e-08;6!UBERON:0010047;3.57e-08;6!UBERON:0003408;3.57e-08;6!UBERON:0000167;3.57e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,3.50e-11,2;UBERON:0001044,3.27e-08,6;UBERON:0003293,3.27e-08,6;UBERON:0003294,3.27e-08,6;UBERON:0010047,3.27e-08,6;UBERON:0000167,3.27e-08,6 | |||
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| ||
|short_description=p@chr5:1155978..1156004,- | |short_description=p@chr5:1155978..1156004,- | ||
}} | }} |
Latest revision as of 08:54, 30 July 2015
Short description: | p@chr5:1155978..1156004, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:1155978..1156004, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.99e-16 | 3 |
pro-NK cell | 5.99e-16 | 3 |
B cell | 1.47e-08 | 14 |
epithelial cell of stomach | 7.79e-08 | 3 |
lymphoid lineage restricted progenitor cell | 1.04e-07 | 52 |
lymphocyte | 1.57e-07 | 53 |
common lymphoid progenitor | 1.57e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 3.50e-11 | 2 |
saliva-secreting gland | 3.27e-08 | 6 |
gland of oral region | 3.27e-08 | 6 |
gland of foregut | 3.27e-08 | 6 |
oral gland | 3.27e-08 | 6 |
oral cavity | 3.27e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 3.50e-11 | 2 |
gastrointestinal system cancer | 3.95e-09 | 14 |